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[netCDF #XOQ-789352]: make check fails when installing netcdf-4.3.3

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  • Subject: [netCDF #XOQ-789352]: make check fails when installing netcdf-4.3.3
  • Date: Wed, 11 Nov 2015 10:02:23 -0700
Hello,

From the `test-suite.log` file you provided, I see the following error repeated:

./tst_h_dimscales2: error while loading shared libraries: libhdf5_hl.so.10: 
cannot open shared object file: No such file or directory

This suggests to me that your shared libraries are not on your LD_LIBRARY_PATH. 
 Try running `make check` as follows:

    $ LD_LIBRARY_PATH=/usr/local/lib make check

If this works, you will need to update your LD_LIBRARY_PATH variable, which is 
used when a program runs to locate shared libraries.  If this does not work, 
please let me know.

I hope this helps,

-Ward

> Hi All,
> 
> I am experiencing a failure when building netcdf-4.3.3 with hdf5 support
> on my Linux machine (GNOME Desktop distributed by Debian). I firstly
> built HDF5-1.8.15 with zlib-1.2.8, and it was successful. Then I started
> to build netcdf-4.3.3 with the commands below:
> 
> CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib ./configure
> --prefix=/usr/local --enable-netcdf-4 --enable-dap
> 
> make clean
> make
> make check
> 
> Then I got a failure message as below:
> 
> make  check-TESTS
> make[2]: Entering directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> make[3]: Entering directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> FAIL: tst_h_files
> FAIL: tst_h_files2
> FAIL: tst_h_files4
> FAIL: tst_h_atts
> FAIL: tst_h_atts3
> FAIL: tst_h_atts4
> FAIL: tst_h_vars
> FAIL: tst_h_vars2
> FAIL: tst_h_vars3
> FAIL: tst_h_grps
> FAIL: tst_h_compounds
> FAIL: tst_h_compounds2
> FAIL: tst_h_wrt_cmp
> FAIL: tst_h_rd_cmp
> FAIL: tst_h_vl
> FAIL: tst_h_opaques
> FAIL: tst_h_strings
> FAIL: tst_h_strings1
> FAIL: tst_h_strings2
> FAIL: tst_h_ints
> FAIL: tst_h_dimscales
> FAIL: tst_h_dimscales1
> FAIL: tst_h_dimscales2
> FAIL: tst_h_dimscales3
> FAIL: tst_h_enums
> FAIL: tst_h_dimscales4
> make[4]: Entering directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> make[4]: Nothing to be done for `all'.
> make[4]: Leaving directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> ============================================================================
> Testsuite summary for netCDF 4.3.3.1
> ============================================================================
> # TOTAL: 26
> # PASS:  0
> # SKIP:  0
> # XFAIL: 0
> # FAIL:  26
> # XPASS: 0
> # ERROR: 0
> ============================================================================
> See h5_test/test-suite.log
> Please report to address@hidden
> ============================================================================
> make[3]: *** [test-suite.log] Error 1
> make[3]: Leaving directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> make[2]: *** [check-TESTS] Error 2
> make[2]: Leaving directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory 
> `/home/pg/zhou/NetCDF_serial/netcdf-4.3.3.1/h5_test'
> make: *** [check-recursive] Error 1
> 
> The document test-suite.log mentioned above is attached below:
> 
> 
> Any help appreciated. Many thanks.
> 
> Wencai Zhou
> 
> School of Civil, Environmental and Mining Engineering,
> The University of Western Australia
> M015, 35 Stirling Highway
> Crawley WA 6009
> 
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Ticket Details
===================
Ticket ID: XOQ-789352
Department: Support netCDF
Priority: Normal
Status: Closed