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[netCDF #RIO-654774]: ERROR INSTALLING NETCDF-FORTRAN WITH MPIICC AND MPIIFORT
- Subject: [netCDF #RIO-654774]: ERROR INSTALLING NETCDF-FORTRAN WITH MPIICC AND MPIIFORT
- Date: Wed, 01 Jul 2015 13:06:35 -0600
Hi,
The specific error message you're etting is not related to netCDF, but instead
looks
like something to do with how your compiler environment is configured. There is
no
call to a function like `tbk_string_stack_signal_impl' in the netCDF-C or netCDF
Fortran libraries, and it also doesn't look like anything in HDF5 libraries.
My first recommendation would be to make sure you are following these
instructions
for building netCDF-Fortran, including especially the section on "Building with
Static
Libraries":
http://www.unidata.ucar.edu/netcdf/docs/building_netcdf_fortran.html
The reason to pay attention to building with static libraries is in case you
have to link
statically when using the mpicc and mpifortran wrappers for parallel libraries.
Also, please send us a copy of the config.log generated when you ran the
netCDF-Fortran configure script, as it contains information that may help us to
diagnose the problem you are seeing.
--Russ
> Hi
>
> I am trying to install netcdf-fortran in our IBM cluster using mpiicc anf
> mpiifortran.But I got the following error:
> checking if Fortran "byte" is C "signed char"... configure: error: Could not
> link conftestf.o and conftest.o
> When I have checked the config.log file I found the following error:
>
> configure:17817: checking if Fortran "byte" is C "signed char"
> configure:17827: mpiicc -c -I/wrf/WRF_LIB/LIB_MPI/include -m64 conftest.c
> configure:17830: $? = 0
> configure:17833: mpiifort -m64 -c conftestf.f
> configure:17836: $? = 0
> configure:17839: mpiifort -o conftest -m64 -L/wrf/WRF_LIB/LIB_MPI/lib
> conftestf.o conftest.o
> /home/spscience1/intel/composer_xe_2015.3.187/compiler/lib/intel64/libifcore.a(tbk_traceback.o):
> In function `tbk_stack_trace_impl':
> tbk_traceback.c:(.text+0x1320): undefined reference to
> `tbk_string_stack_signal_impl'
> configure:17842: $? = 1
> configure:17865: error: Could not link conftestf.o and conftest.o
>
> Kindly let me know how to go about it. I have tried a lot but nothing is
> positive.
> Waiting for your replyRekha
>
>
>
>
Russ Rew UCAR Unidata Program
address@hidden http://www.unidata.ucar.edu
Ticket Details
===================
Ticket ID: RIO-654774
Department: Support netCDF
Priority: Normal
Status: Closed