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[netCDF #YLO-819489]: Failures with netcdf-fortran-4.4-beta1
- Subject: [netCDF #YLO-819489]: Failures with netcdf-fortran-4.4-beta1
- Date: Mon, 03 Dec 2012 16:34:02 -0700
Craig,
> Thank you for the info, Russ!
>
> I will rollback to a previous version that build successfully.
The C library bug that caused build errors with netcdf-fortran-4.4-beta1
is now fixed in our svn tree. The fix is in the file
http://svn.unidata.ucar.edu/repos/netcdf/trunk/libsrc/nc3internal.c
in case you want to rebuild the C library with that change and then
rebuild netcdf-fortran-4.4-beta1 against that installed library.
--Russ
> Best,
> Craig
>
> On Dec 2, 2012, at 2:58 PM, Unidata netCDF Support <address@hidden> wrote:
>
> > Hi Craig,
> >
> >> Is there a workaround?
> >
> > Not yet with the current snapshot you are using. We just recently
> > discovered a problem in a C library
> > change made back in early September that broke Fortran builds since then.
> > So the only workaround
> > currently is to use a revision of the C library from svn r2541 or earlier.
> > We're working on a fix before
> > the next Fortran release.
> >
> > --Russ
> >
> >> config.log.gz attached.
> >>
> >> Thank you!
> >> Craig
> >>
> >> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> >> make check | & tee check.log
> >>
> >> Making check in fortran
> >> make[1]: Entering directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/fortran'
> >> make check-am
> >> make[2]: Entering directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/fortran'
> >> make[2]: Nothing to be done for `check-am'.
> >> make[2]: Leaving directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/fortran'
> >> make[1]: Leaving directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/fortran'
> >> Making check in nf_test
> >> make[1]: Entering directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >> make nf_test ftst_vars ftst_vars2 ftst_vars3 ftst_vars4 ftst_vars5
> >> ftst_vars6 ftst_types ftst_types2 ftst_types3 ftst_groups f90tst_vars
> >> tst_types tst_types2 f90tst_vars_vlen tst_f90_nc4 f90tst_grps f90tst_fill
> >> f90tst_fill2 f90tst_vars3 f90tst_vars4 f90tst_vars2 tst_f90
> >> make[2]: Entering directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >> make[2]: `nf_test' is up to date.
> >> make[2]: `ftst_vars' is up to date.
> >> make[2]: `ftst_vars2' is up to date.
> >> make[2]: `ftst_vars3' is up to date.
> >> make[2]: `ftst_vars4' is up to date.
> >> make[2]: `ftst_vars5' is up to date.
> >> make[2]: `ftst_vars6' is up to date.
> >> make[2]: `ftst_types' is up to date.
> >> make[2]: `ftst_types2' is up to date.
> >> make[2]: `ftst_types3' is up to date.
> >> make[2]: `ftst_groups' is up to date.
> >> make[2]: `f90tst_vars' is up to date.
> >> make[2]: `tst_types' is up to date.
> >> make[2]: `tst_types2' is up to date.
> >> make[2]: `f90tst_vars_vlen' is up to date.
> >> make[2]: `tst_f90_nc4' is up to date.
> >> make[2]: `f90tst_grps' is up to date.
> >> make[2]: `f90tst_fill' is up to date.
> >> make[2]: `f90tst_fill2' is up to date.
> >> make[2]: `f90tst_vars3' is up to date.
> >> make[2]: `f90tst_vars4' is up to date.
> >> make[2]: `f90tst_vars2' is up to date.
> >> make[2]: `tst_f90' is up to date.
> >> make[2]: Leaving directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >> make check-TESTS
> >> make[2]: Entering directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >>
> >> *** Testing netCDF-3 Fortran 77 API.
> >> NetCDF version:
> >> 4.2.1.1-snapshot2012112823 of Nov 29 2012 16:48:19 $
> >>
> >> *** testing nf_strerror ...
> >> *** testing nf_open ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_open! ###
> >> *** testing nf_close ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >> nf_close in define mode: NetCDF: Not a valid ID
> >>
> >> ### 4 FAILURES TESTING nf_close! ###
> >> *** testing nf_inq ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_inq! ###
> >> *** testing nf_inq_dimid ...
> >> *** testing nf_inq_dim ...
> >> *** testing nf_inq_dimlen ...
> >> *** testing nf_inq_dimname ...
> >> *** testing nf_inq_varid ...
> >> *** testing nf_inq_var ...
> >> *** testing nf_inq_natts ...
> >> *** testing nf_inq_ndims ...
> >> *** testing nf_inq_nvars ...
> >> *** testing nf_inq_unlimdim ...
> >> *** testing nf_inq_format ...
> >> *** testing nf_inq_vardimid ...
> >> *** testing nf_inq_varname ...
> >> *** testing nf_inq_varnatts ...
> >> *** testing nf_inq_varndims ...
> >> *** testing nf_inq_vartype ...
> >> *** testing nf_get_var1_text ...
> >> *** testing nf_get_var1_int1 ...
> >> *** testing nf_get_var1_int2 ...
> >> *** testing nf_get_var1_int ...
> >> *** testing nf_get_var1_real ...
> >> *** testing nf_get_var1_double ...
> >> *** testing nf_get_var_text ...
> >> *** testing nf_get_var_int1 ...
> >> *** testing nf_get_var_int2 ...
> >> *** testing nf_get_var_int ...
> >> *** testing nf_get_var_real ...
> >> *** testing nf_get_var_double ...
> >> *** testing nf_get_vara_text ...
> >> *** testing nf_get_vara_int1 ...
> >> *** testing nf_get_vara_int2 ...
> >> *** testing nf_get_vara_int ...
> >> *** testing nf_get_vara_real ...
> >> *** testing nf_get_vara_double ...
> >> *** testing nf_get_vars_text ...
> >> *** testing nf_get_vars_int1 ...
> >> *** testing nf_get_vars_int2 ...
> >> *** testing nf_get_vars_int ...
> >> *** testing nf_get_vars_real ...
> >> *** testing nf_get_vars_double ...
> >> *** testing nf_get_varm_text ...
> >> *** testing nf_get_varm_int1 ...
> >> *** testing nf_get_varm_int2 ...
> >> *** testing nf_get_varm_int ...
> >> *** testing nf_get_varm_real ...
> >> *** testing nf_get_varm_double ...
> >> *** testing nf_get_att_text ...
> >> *** testing nf_get_att_int1 ...
> >> *** testing nf_get_att_int2 ...
> >> *** testing nf_get_att_int ...
> >> *** testing nf_get_att_real ...
> >> *** testing nf_get_att_double ...
> >> *** testing nf_inq_att ...
> >> *** testing nf_inq_attname ...
> >> *** testing nf_inq_attid ...
> >> *** testing nf_inq_attlen ...
> >> *** testing nf_inq_atttype ...
> >> *** testing nf_create ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >> nf_close: NetCDF: Not a valid ID
> >> nf_inq: wrong number of global atts returned, 1
> >>
> >> ### 5 FAILURES TESTING nf_create! ###
> >> *** testing nf_redef ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_redef! ###
> >> *** testing nf_enddef ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_enddef! ###
> >> *** testing nf_sync ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_sync! ###
> >> *** testing nf_abort ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_abort! ###
> >> *** testing nf_def_dim ...
> >> *** testing nf_rename_dim ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_rename_dim! ###
> >> *** testing nf_def_var ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_def_var! ###
> >> *** testing nf_put_var1_text ...
> >> *** testing nf_put_var1_int1 ...
> >> *** testing nf_put_var1_int2 ...
> >> *** testing nf_put_var1_int ...
> >> *** testing nf_put_var1_real ...
> >> *** testing nf_put_var1_double ...
> >> *** testing nf_put_var_text ...
> >> *** testing nf_put_var_int1 ...
> >> *** testing nf_put_var_int2 ...
> >> *** testing nf_put_var_int ...
> >> *** testing nf_put_var_real ...
> >> *** testing nf_put_var_double ...
> >> *** testing nf_put_vara_text ...
> >> *** testing nf_put_vara_int1 ...
> >> *** testing nf_put_vara_int2 ...
> >> *** testing nf_put_vara_int ...
> >> *** testing nf_put_vara_real ...
> >> *** testing nf_put_vara_double ...
> >> *** testing nf_put_vars_text ...
> >> *** testing nf_put_vars_int1 ...
> >> *** testing nf_put_vars_int2 ...
> >> *** testing nf_put_vars_int ...
> >> *** testing nf_put_vars_real ...
> >> *** testing nf_put_vars_double ...
> >> *** testing nf_put_varm_text ...
> >> *** testing nf_put_varm_int1 ...
> >> *** testing nf_put_varm_int2 ...
> >> *** testing nf_put_varm_int ...
> >> *** testing nf_put_varm_real ...
> >> *** testing nf_put_varm_double ...
> >> *** testing nf_rename_var ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_rename_var! ###
> >> *** testing nf_put_att_text ...
> >> NF_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_text! ###
> >> *** testing nf_put_att_int1 ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_int1! ###
> >> *** testing nf_put_att_int2 ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_int2! ###
> >> *** testing nf_put_att_int ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_int! ###
> >> *** testing nf_put_att_real ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_real! ###
> >> *** testing nf_put_att_double ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_put_att_double! ###
> >> *** testing nf_copy_att ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_copy_att! ###
> >> *** testing nf_rename_att ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_rename_att! ###
> >> *** testing nf_del_att ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_del_att! ###
> >> *** testing nf_set_fill ...
> >> nf_create: NetCDF: File exists && NC_NOCLOBBER
> >>
> >> ### 2 FAILURES TESTING nf_set_fill! ###
> >> *** testing nf_set_default_format ...
> >> Total number of failures: 47
> >> 2
> >> FAIL: nf_test
> >>
> >> *** Testing creating file with fill values.
> >> *** SUCCESS!
> >> PASS: create_fills.sh
> >>
> >> *** Testing definition of netCDF-4 vars from Fortran 77.
> >> *** SUCCESS!
> >> PASS: ftst_vars
> >>
> >> *** Testing netCDF-4 vars from F77 with new types.
> >> *** SUCCESS!
> >> PASS: ftst_vars2
> >>
> >> *** Testing enum and opaque types.
> >> *** SUCCESS!
> >> PASS: ftst_vars3
> >>
> >> *** Testing VLEN types.
> >> *** SUCCESS!
> >> PASS: ftst_vars4
> >>
> >> *** Testing compound types.
> >> *** SUCCESS!
> >> PASS: ftst_vars5
> >>
> >> *** Testing fill values.
> >> *** SUCCESS!
> >> PASS: ftst_vars6
> >>
> >> *** Testing netCDF-4 compound type from F77.
> >> *** SUCCESS!
> >> PASS: ftst_types
> >>
> >> *** Testing netCDF-4 compound types from F77 some more.
> >> *** SUCCESS!
> >> PASS: ftst_types2
> >>
> >> *** Testing netCDF-4 user-defined types and groups.
> >> *** SUCCESS!
> >> PASS: ftst_types3
> >>
> >> *** Testing netCDF-4 groups from F77.
> >> *** SUCCESS!
> >> PASS: ftst_groups
> >>
> >> *** Testing definition of netCDF-4 vars from Fortran 90.
> >> *** SUCCESS!
> >> PASS: f90tst_vars
> >>
> >> *** Testing new netCDF-4 types from Fortran 90.
> >> *** SUCCESS!
> >> PASS: tst_types
> >>
> >> *** Testing netCDF-4 64-bit integer types from Fortran 90.
> >> *** SUCCESS!
> >> PASS: tst_types2
> >> PASS: f90tst_vars_vlen
> >>
> >> *** testing simple netCDF-4 file.
> >> *** OK!
> >> *** Testing simple classic file.
> >> *** OK!
> >> *** SUCCESS!
> >> PASS: tst_f90_nc4
> >>
> >> *** Testing netCDF-4 groups from Fortran 90.
> >> *** SUCCESS!
> >> PASS: f90tst_grps
> >>
> >> *** Testing netCDF-4 fill values.
> >> *** SUCCESS!
> >> PASS: f90tst_fill
> >>
> >> *** Testing netCDF-4 fill values with unlimited dimension.
> >> *** SUCCESS!
> >> PASS: f90tst_fill2
> >>
> >> *** Testing definition of netCDF-4 vars from Fortran 90.
> >> *** SUCCESS!
> >> PASS: f90tst_vars3
> >>
> >> *** Testing definition of netCDF-4 vars from Fortran 90.
> >> *** SUCCESS!
> >> PASS: f90tst_vars4
> >>
> >> *** Testing definition of netCDF-4 vars from Fortran 90.
> >> *** SUCCESS!
> >> PASS: f90tst_vars2
> >>
> >> *** Testing netCDF-3 Fortran 90 API.
> >> *** SUCCESS!
> >> PASS: tst_f90
> >> ================================================
> >> 1 of 24 tests failed
> >> Please report to address@hidden
> >> ================================================
> >> make[2]: *** [check-TESTS] Error 1
> >> make[2]: Leaving directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >> make[1]: *** [check-am] Error 2
> >> make[1]: Leaving directory
> >> `/nethome/cmattock/usr/local/netcdf-fortran-4.4-beta1/nf_test'
> >> make: *** [check-recursive] Error 1
> >>
> >>
> >>
> >
> > Russ Rew UCAR Unidata Program
> > address@hidden http://www.unidata.ucar.edu
> >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: YLO-819489
> > Department: Support netCDF
> > Priority: Normal
> > Status: Closed
> >
>
>
Russ Rew UCAR Unidata Program
address@hidden http://www.unidata.ucar.edu
Ticket Details
===================
Ticket ID: YLO-819489
Department: Support netCDF
Priority: Normal
Status: Closed