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[netCDF #NZJ-424171]: Trouble Compiling on Mac OS X 10.7

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  • Subject: [netCDF #NZJ-424171]: Trouble Compiling on Mac OS X 10.7
  • Date: Thu, 06 Sep 2012 15:12:37 -0600
Greetings Sean,

It looks like HD5 was not compiled with 64-bit support. Try the following:

otool -hv /Users/seancrowell/local/lib/libhdf5_hl.dylib

(look for cputype in the output table)

Make sure to source the correct intel environment scripts before compiling
hdf5 - something like:

source <path-to-compiler>/bin/ifortvars.sh intel64
source <path-to-compiler>/bin/iccvars.sh intel64

I hope all is well at OU!

Sean


> If it helps to narrow things down,  I get this error when I try to compile 
> NetCDF 4.2.1.1:
> 
> libtool: link: gcc -g -O2 -o .libs/rewrite-scalar rewrite-scalar.o  
> -L/Users/seancrowell/local/lib ../liblib/.libs/libnetcdf.dylib 
> /Users/seancrowell/local/lib/libhdf5_hl.dylib 
> /Users/seancrowell/local/lib/libhdf5.dylib 
> /Users/seancrowell/local/lib/libsz.dylib -lm -lz -lcurl
> ld: can't open output file for writing: .libs/rewrite-scalar, errno=13 for 
> architecture x86_64
> collect2: ld returned 1 exit status
> make[4]: *** [rewrite-scalar] Error 1
> make[3]: *** [check-am] Error 2
> make[2]: *** [check-recursive] Error 1
> make[1]: *** [check] Error 2
> make: *** [check-recursive] Error 1
> 
> 
> On Sep 6, 2012, at 11:16 AM, Unidata netCDF Support wrote:
> 
> >
> > Crowell, Sean M.,
> >
> > Your Ticket has been received, and a Unidata staff member will review it 
> > and reply accordingly. Listed below are details of this new Ticket. Please 
> > make sure the Ticket ID remains in the Subject: line on all correspondence 
> > related to this Ticket.
> >
> >    Ticket ID: NZJ-424171
> >    Subject: Trouble Compiling on Mac OS X 10.7
> >    Department: Support netCDF
> >    Priority: Normal
> >    Status: Open
> >
> >
> >
> > The NetCDF libraries are developed at the Unidata Program Center/UCAR,
> > in Boulder, Colorado; we are funded primarily by the U.S. National
> > Science Foundation.
> >
> > All support requests are handled by the development team; no
> > dedicated support staff are funded at this time. For this reason
> > we cannot guarantee response times, nor can we resolve every support
> > issue, although we do our best to respond within 72 hours.
> >
> > It is in the nature of support requests that the same question is
> > asked many times. We urge you to search the support archives for
> > material relating to your support inquiry:
> >
> > http://www.unidata.ucar.edu/search.jsp?support&netcdf
> >
> > If you are having trouble building netCDF, please take a look at the
> > "Build Troubleshooter" section of the netCDF home page:
> >
> > http://www.unidata.ucar.edu/software/netcdf/
> >
> > Windows users should see the FAQ list:
> >
> > http://www.unidata.ucar.edu/software/netcdf/docs/faq.html#windows_netcdf4
> >
> > Complete documentation (including a tutorial, and sample programs in
> > C, Fortran, Java, and other programming languages) can be found on the
> > netCDF Documentation page:
> >
> > http://www.unidata.ucar.edu/software/netcdf/docs/
> >
> > If you resolve your issue through one of these methods, please send a
> > reply to this email letting us know that you no longer require
> > assistance. This will help us spend more time on netCDF development.
> >
> > Best regards,
> >
> > Unidata User Support
> >
> 
> 

Ticket Details
===================
Ticket ID: NZJ-424171
Department: Support netCDF
Priority: Normal
Status: Open