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[netCDF #NHT-503832]: RNetCDF installation
- Subject: [netCDF #NHT-503832]: RNetCDF installation
- Date: Wed, 02 Sep 2009 12:49:22 -0600
> I'm trying to install RNetCDF in Linux machine using
> install.packages("RNetCDF",lib="path_to_R_library") command but it failed.
> Could you help me?
>
> checking udunits.h usability... yes
> checking udunits.h presence... yes
> checking for udunits.h... yes
> configure: creating ./config.status
> config.status: creating src/Makevars
> ** libs
> gcc -std=gnu99 -I/nfs/rain/data/raid4/users/ajamroen/R_new/R-2.8.1/include
> -I/usr/local/include -fpic -g -O2 -c RNetCDF.c -o RNetCDF.o
> gcc -std=gnu99 -shared -L/usr/local/lib64 -o RNetCDF.so RNetCDF.o -lnetcdf
> -ludunits
> /usr/lib64/gcc/x86_64-suse-linux/4.2.1/../../../../x86_64-suse-linux/bin/ld:
> /usr/local/lib/libnetcdf.a(attr.o): relocation R_X86_64_32 against `a local
> symbol' can not be used when making a shared object; recompile with -fPIC
> /usr/local/lib/libnetcdf.a: could not read symbols: Bad value
> collect2: ld returned 1 exit status
> make: *** [RNetCDF.so] Error 1
> chmod: cannot access
> `/nfs/rain/data/raid4/users/ajamroen/R_new/R-2.8.1/library/RNetCDF/libs/*':
> No such file or directory
> ERROR: compilation failed for package 'RNetCDF'
> ** Removing
> '/nfs/rain/data/raid4/users/ajamroen/R_new/R-2.8.1/library/RNetCDF'
> ** Restoring previous
> '/nfs/rain/data/raid4/users/ajamroen/R_new/R-2.8.1/library/RNetCDF'
>
>
Sorry, but Rnetcdf is not our product. You will have to contact the Rnetcdf
support team.
Good luck!
Ed
Ticket Details
===================
Ticket ID: NHT-503832
Department: Support netCDF
Priority: Urgent
Status: Closed