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[netCDF #IRF-709042]: netcdf-3.6.2-beta3 failures on HP XC Opteron platform

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  • Subject: [netCDF #IRF-709042]: netcdf-3.6.2-beta3 failures on HP XC Opteron platform
  • Date: Thu, 13 Jul 2006 18:21:47 -0600
> Dear Sir:
> 
> I am compiling NetCDF 3.6.2-beta3 on an HP XC Opteron-based Linux cluster at
> ASC MSRC.  I used the following steps:
> 
> setenv FC        pgf90
> setenv F90       pgf90
> setenv CC        gcc
> setenv CXX       pgCC
> setenv FFLAGS    "-O3 -fastsse -tp k8-64"
> setenv F90FLAGS  "-O3 -fastsse -tp k8-64"
> setenv CFLAGS    "-O3 -funroll-loops -march=k8 -m64 -mfpmath=sse -msse2
> -ffast-math"
> setenv CXXFLAGS  "-O3 -fastsse -tp k8-64"
> setenv CPPFLAGS  "-DNDEBUG -DpgiFortran -D_FILE_OFFSET_BITS=64 \
> -D_LARGEFILE_SOURCE"
> 
> ./configure
> ./make
> ./make tests
> 
> I had the following C++ failures:
> 
> libtool: link: pgCC -O3 -fastsse -tp k8-64 -o .libs/nctst nctst.o
> -L/workspace/oppe/netcdf-3.6.2-beta3/cxx
> -L/workspace/oppe/netcdf-3.6.2-beta3/libsrc ../cxx/.libs/libnetcdf_c++.so
> ../libsrc/.libs/libnetcdf.so -Wl,--rpath -Wl,/usr/local/lib
> libtool: link: creating nctst
> make[2]: Leaving directory `/workspace/oppe/netcdf-3.6.2-beta3/cxx'
> make  check-TESTS
> make[2]: Entering directory `/workspace/oppe/netcdf-3.6.2-beta3/cxx'
> C++ runtime abort: internal error: static object marked for destruction more
> than once
> /bin/sh: line 1: 16554 Aborted                 ${dir}$tst
> FAIL: nctst
> 
> *** Testing C++ API test program output.
> *** dumping classic format file to nctst_classic.cdl and comparing...
> /workspace/oppe/netcdf-3.6.2-beta3/ncdump/.libs/lt-ncdump: nctst_classic.nc:
> No such file or directory
> FAIL: run_nc_tests.sh
> =========================================
> 2 of 2 tests failed
> Please report to address@hidden
> =========================================
> make[2]: *** [check-TESTS] Error 1
> make[2]: Leaving directory `/workspace/oppe/netcdf-3.6.2-beta3/cxx'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory `/workspace/oppe/netcdf-3.6.2-beta3/cxx'
> make: *** [check-recursive] Error 1
> 
> 
> These same definitions worked with the netcdf-3.6.1 installation without any
> test failures.
> 
> Tom Oppe
> 
> 
> 

Thanks Tom!

We are looking into this now. There have been some changes in the C++ API code 
in this release, or this may be a configure issue.

I'll let you know when we have a new beta release which may work better for you.

Thanks,

Ed Hartnett

Ticket Details
===================
Ticket ID: IRF-709042
Department: Support netCDF
Priority: Critical
Status: Open