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[netCDF #AIQ-845519]: Ask about parallel hdf5

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  • Subject: [netCDF #AIQ-845519]: Ask about parallel hdf5
  • Date: Wed, 20 Nov 2019 17:54:23 -0700
Hello,

I've reviewed the config.log file you provided, but it is not immediately 
obvious why the `configure` script fails.  I'm afraid I'll have to refer you to 
support for the HDF group, found here: 
https://portal.hdfgroup.org/display/support.  Hopefully they will be able to 
help guide you in installing their software.

Thank you, have a good day,

-Ward

> Dear scientist?
> I'm one of the users of Netcdf4.4 and hdf5. I want to install hdf5-1.8.20 
> compiling by mpicc. First, I installed mpich-3.2.1 using gcc-8.3.0 
> (./configure --prefix=/home/shenhf/majun/setup-mpich-3.2.1 
> --disable-fortran), and make sure it work successfully. Next, I change the 
> bashrc file as follows:
> export CC=mpicc
> export CXX=mpicxx
> export FC=mpif90
> export F77=mpif90
> 
> Then:
> (1)export CPPFLAGS="-fPIC -I/home/shenhf/majun/setup/mpich-3.2.1/include"
> 
> (2)export LDFLAGS="-L/home/shenhf/majun/setup/mpich-3.2.1/lib"
> 
> (3)./configure --prefix=/home/shenhf/majun/setup/hdf5-1.8.20 
> --with-zlib=/usr/local/zlib --enable-fortran --enable-fortran2003 
> -enable-parallel --with-pic
> 
> >> checking for Fortran flag to compile .f90 files... unknown
> configure: error: Fortran could not compile .f90 files
> 
> Then I use: ./configure --prefix=/home/shenhf/majun/setup/hdf5-1.8.20 
> --with-zlib=/usr/local/zlib --enable-fortran --enable-fortran2003 
> -enable-parallel --with-pic FC=gfortran
> >>checking whether a simple MPI-IO C program can be linked... yes
> checking whether a simple MPI-IO Fortran program can be linked... no
> configure: error: unable to link a simple MPI-IO Fortran program
> 
> The config.log is attached below. I don't know what's wrong and beg for your 
> suggestion, any help or suggestion will be highly appreciated.
> 
> 
> ------------------------------
> --
> Thanks for your attention...
> --
> Best Regards,
> 
> ??
> SENDIMAGE??????????????
> ?????????129?, 430079
> Email: address@hidden/address@hidden
> Jun Ma, PHD Candidate
> School of Resource and Environmental Sciences,
> Wuhan University, Wuhan 430079, China


Ticket Details
===================
Ticket ID: AIQ-845519
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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