[netCDF #EGO-288225]: Cannot link to hdf5.

Hi,

Can you provide the config.log file generated when you ran `configure`? It will 
provide additional information which may be helpful for us to discover what is 
going wrong.

Thank you,

-Ward

> Hi there,
> 
> I have encountered the error:
> 
> "configure: error: Can't find or link to the hdf5 library. Use
> --disable-netcdf-4, or see config.log for errors."
> 
> when I run configure on version 4.6.1 like so:
> 
> """
> ../configure CC=mpicc \
> CXX=mpicxx \
> FC=mpifort \
> CPPFLAGS="-I${HDF5_DIR}/include" \
> CFLAGS="-I${HDF5_DIR}/include" \
> LDFLAGS="-L${HDF5_DIR}/lib" \
> --prefix=${NETCDF4_DIR};
> """
> 
> I have compiled HDF5 version 1.10.2 :
> 
> """
> ldd ${HDF5_DIR}/lib/libhdf5.so.101.1.0
> linux-vdso.so.1 (0x00007fff423fe000)
> libsz.so.2 => not found
> libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007fc7f3e80000)
> libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007fc7f3c7c000)
> libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007fc7f38de000)
> libmpich.so.0 => /usr/lib/x86_64-linux-gnu/libmpich.so.0
> (0x00007fc7f3428000)
> libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007fc7f3037000)
> /lib64/ld-linux-x86-64.so.2 (0x00007fc7f4688000)
> libcr.so.0 => /usr/lib/libcr.so.0 (0x00007fc7f2e2c000)
> libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0
> (0x00007fc7f2c0d000)
> librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007fc7f2a05000)
> libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007fc7f27ed000)
> """
> 
> I have linked HDF5 with zlib, as suggested here:
> 
> https://www.unidata.ucar.edu/software/netcdf/docs/getting_and_building_netcdf.html
> 
> So, I'm stumped!
> 
> Can anyone help?  Thanks.
> 
> -Evan
> 
> 


Ticket Details
===================
Ticket ID: EGO-288225
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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