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[netCDF #TSJ-231955]: netcdf-4.3.3.1 is installed sucessfully,but when "make check" error appears

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  • Subject: [netCDF #TSJ-231955]: netcdf-4.3.3.1 is installed sucessfully,but when "make check" error appears
  • Date: Wed, 06 Jan 2016 10:42:10 -0700
Hello,

After adding the line to .bashrc, did you run the command `source ~/.bashrc` ?  
You may need to run this after you run the other two source commands.

If this does not work, you may need to speak with your system administrator; 
the issue is (as you have figured out), the run-time loader either cannot find 
this file, or it cannot access this file.  It may be the case that you do not 
have access to run `libimf.so`.

I'm sorry I cannot provide a more positive response, but what you are doing is 
correct and should work.  This makes me wonder if the issue is something 
specific to your system.

-Ward

> Dear, I am sorry to trouble ,but when I install netcdf-4.3.3.1 on my Linux 
> system,I encountered an error. I follow the directon pasted on the 
> net(https://software.intel.com/en-us/articles/performance-tools-for-software-developers-building-netcdf-with-the-intel-compilers)
>  as following and it works well while make and make install.I thought I am 
> succeed upon seeing the message " Congratulations! You have successfully 
> installed netCDF! ",but after make check,the error apprars as following.
> 
> 
> So,can you spare your treasure time to give me direction or some suggestion?
> 
> 
> Thank you very much!
> 
> 
> xu yong
> 
> 
> 1.The error
> ============================================================================
> Testsuite summary for netCDF 4.3.3.1
> ============================================================================
> # TOTAL: 1
> # PASS:  0
> # SKIP:  0
> # XFAIL: 0
> # FAIL:  1
> # XPASS: 0
> # ERROR: 0
> ============================================================================
> See ncgen3/test-suite.log
> Please report to address@hidden
> ============================================================================
> make[3]: *** [test-suite.log] Error 1
> make[3]: Leaving directory 
> `/storage03/xuyong/libraries/netcdf-4.3.3.1/netcdf-4.3.3.1/ncgen3'
> make[2]: *** [check-TESTS] Error 2
> make[2]: Leaving directory 
> `/storage03/xuyong/libraries/netcdf-4.3.3.1/netcdf-4.3.3.1/ncgen3'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory 
> `/storage03/xuyong/libraries/netcdf-4.3.3.1/netcdf-4.3.3.1/ncgen3'
> make: *** [check-recursive] Error 1
> 
> -----------------------------------------------------------------------------------------------------------------
> 2. My Linux:
> LSB Version:    
> :core-3.1-amd64:core-3.1-ia32:core-3.1-noarch:graphics-3.1-amd64:graphics-3.1-ia32:graphics-3.1-noarch
> Distributor ID: RedHatEnterpriseServer
> Description:    Red Hat Enterprise Linux Server release 5.4 (Tikanga)
> Release:        5.4
> Codename:       Tikanga
> 
> 3. set the path in  ~/.bashrc
> export CC=icc
> export CXX=icpc
> export CFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export CXXFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export F77=ifort
> export FC=ifort
> export F90=ifort
> export FFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export CPP='icc -E'
> export CXXCPP='icpc -E'
> 
> --------------------------------------------------------------------------------------------------------------------------------------------------
> 4.I have try the method that shared on the net:
> 
> 
> $ locate libmif.so
> $/opt/intel/composer_xe_2013.0.079/compiler/lib/intel64/libimf.so
> 
> 
> vi ~/.bashrc
> source  
> /storage03/xuyong/libraries_install/l_cluster_2013.1/composer_xe_2013_sp1.2.144/compiler/bin/ifortvars.sh
>  intel64
> source  
> /storage03/xuyong/libraries_install/l_cluster_2013.1/composer_xe_2013_sp1.2.144/compiler/bin/iccvars.sh
>  intel64
> 
> 
> 
> There is libimf.so that can not appear in the 
> path:/storage03/xuyong/libraries_install/l_cluster_2013.1/composer_xe_2013_sp1.2.144/compiler/bin/intel64.Besides,even
>  though I add the path in ~/.bashrc:export 
> LD_LIBRARY_PATH=/storage03/xuyong/libraries_install/l_cluster_2013.1/composer_xe_2013_sp1.2.144/compiler/lib/intel64
> It is still not work!


Ticket Details
===================
Ticket ID: TSJ-231955
Department: Support netCDF
Priority: Normal
Status: Closed