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[netCDF #XHX-916907]: Error while using " make check"

Subject: [netCDF #XHX-916907]: Error while using " make check"
Date: Fri, 03 Apr 2015 09:54:09 -0600
Hi Keerthi,

> I have tried using netcdf-4.3.3.1 and it has worked. However, when I am
> compiling a model I am getting the following error.
> 
> itgn@iitgn-OptiPlex-9020:~/mhm/mhm/releases/5.2$ make
> Checking dependencies ...
> Checking dependencies ...
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/src/mo_file.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/mo_file.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_kind.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_kind.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/src/mo_mhm_constants.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/mo_mhm_constants.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/src/mo_global_variables.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/mo_global_variables.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_append.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_append.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_constants.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_constants.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_message.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_message.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_string_utils.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_string_utils.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/src/mo_init_states.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release/mo_init_states.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_julian.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_julian.o
> /usr/bin/gfortran-4.4 -DGFORTRAN -DgFortran -DCFORTRAN -DNETCDF
> -I/usr/local/netcdf-4.3.3.1/include
> -I/home/iitgn/mhm/mhm/releases/5.2/src/.gnu46.release
> -I/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release -O3 -cpp
> -J/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/ -c
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_ncread.f90 -o
> /home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_ncread.o
> /home/iitgn/mhm/mhm/releases/5.2/lib/mo_ncread.f90:31.56:
> 
> nf90_noerr, nf90_strerror, nf90_inquire_attribute
> 1
> Fatal Error: Can't open module file 'netcdf.mod' for reading at (1): No
> such file or directory
> make: *** [/home/iitgn/mhm/mhm/releases/5.2/lib/.gnu46.release/mo_ncread.o]
> Error 1
> iitgn@iitgn-OptiPlex-9020:~/mhm/mhm/releases/5.2$
> 
> 
> Is this error related to improper installation of netcdf?

It might be.  When you installed the netCDF Fortran 4.4.2 software after 
installing the netCDF C 4.3.3.1 software, following these instructions:

  http://www.unidata.ucar.edu/netcdf/docs/building_netcdf_fortran.html

you needed to specify a location where the netCDF Fortran libraries would be
installed, using the --prefix= option to the netCDF Fortran configure script.
It looks like you used --prefix=/usr/local/netcdf-4.3.3.1. (That's probably 
not an ideal name to use for the directory, because the versions numbers of
the C and Fortran netCDF libraries are different, as they are maintained and 
updated independently.  But it should still work OK, if you don't mind that
the Fortran 4.4.2 library files will be installed there.)

After running configure and make check, you should have completed the 
netCDF Fortran installation by running

  make install

and this should have installed the file "netcdf.mod" in the include 
subdirectory of
the directory specified by the configure --prefix= option of the configure 
script
in the netCDF Fortran source directory. So the file

  /usr/local/netcdf-4.3.3.1/include/netcdf.mod

should exist and be readable, for the Fortran compiler to find it to compile
programs that have "use netcdf" statements. Similarly, the Fortran libraries
files

  /usr/local/netcdf-4.3.3.1/lib/libnetcdff.a

and other libnetcdff.so files (if you installed shared libraries) should be in
the same directory.  If they aren't, either "make install" wasn't run 
successfully
for the Fortran libraries or some other directory was specified as the location
where the netCDF Fortran libraries were to be installed.

--Russ

> address@hidden> wrote:
> 
> > Hello,
> >
> > Can you provide the test-suite.log file generated when running make check?
> >
> > Thank you,
> >
> > -Ward
> >
> > > Dear Support team
> > >
> > >
> > > I am getting the following error during make check
> > >
> > > /usr/local/netcdf-4.1.3/nf_
> > > test/test_read.F:163: undefined reference to `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:139: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:146: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:150: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:152: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:158: undefined reference to
> > > `nf_delete_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:156: undefined reference to
> > > `nf_close_'
> > > test_read.o: In function `test_nf_strerror':
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:82: undefined reference to
> > > `nf_strerror_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_read.F:89: undefined reference to
> > > `nf_strerror_'
> > > test_write.o: In function `test_nf_set_default_format':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1369: undefined reference to
> > > `nf_set_default_format_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1379: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1382: undefined reference to
> > > `nf_put_att_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1384: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1376: undefined reference to
> > > `nf_set_default_format_'
> > > test_write.o: In function `test_nf_set_fill':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1172: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1177: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1180: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1183: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1188: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1195: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1200: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1205: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1216: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1219: undefined reference to
> > > `nf_set_fill_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1227: undefined reference to
> > > `nf_inq_varid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1232: undefined reference to
> > > `nf_put_var1_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1265: undefined reference to
> > > `nf_get_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1260: undefined reference to
> > > `nf_get_var1_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1279: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1282: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1300: undefined reference to
> > > `nf_put_att_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1295: undefined reference to
> > > `nf_put_att_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1307: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1311: undefined reference to
> > > `nf_put_var1_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1328: undefined reference to
> > > `nf_get_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1323: undefined reference to
> > > `nf_get_var1_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1342: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1345: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_del_att':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1046: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1051: undefined reference to
> > > `nf_del_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1072: undefined reference to
> > > `nf_inq_attid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1084: undefined reference to
> > > `nf_inq_varnatts_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1063: undefined reference to
> > > `nf_del_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1066: undefined reference to
> > > `nf_del_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1069: undefined reference to
> > > `nf_del_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1095: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1098: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1101: undefined reference to
> > > `nf_inq_natts_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1108: undefined reference to
> > > `nf_inq_varnatts_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1076: undefined reference to
> > > `nf_inq_natts_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1116: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1120: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1129: undefined reference to
> > > `nf_del_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1135: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1138: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_rename_att':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:896: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:901: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:922: undefined reference to
> > > `nf_inq_attid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:912: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:915: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:919: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:931: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:934: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:945: undefined reference to
> > > `nf_inq_attname_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:950: undefined reference to
> > > `nf_inq_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:972: undefined reference to
> > > `nf_get_att_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1008: undefined reference to
> > > `nf_inq_attid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1002: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1005: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1016: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:1020: undefined reference to
> > > `nf_delete_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:958: undefined reference to
> > > `nf_get_att_text_'
> > > test_write.o: In function `test_nf_copy_att':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:745: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:748: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:780: undefined reference to
> > > `nf_copy_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:761: undefined reference to
> > > `nf_copy_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:765: undefined reference to
> > > `nf_copy_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:768: undefined reference to
> > > `nf_copy_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:771: undefined reference to
> > > `nf_copy_att_'
> > > test_write.o:/usr/local/netcdf-4.1.3/nf_test/test_write.F:774: more
> > > undefined references to `nf_copy_att_' follow
> > > test_write.o: In function `test_nf_copy_att':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:786: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:791: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:794: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:802: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:805: undefined reference to
> > > `nf_put_att_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:814: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:819: undefined reference to
> > > `nf_rename_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:823: undefined reference to
> > > `nf_copy_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:828: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:833: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:838: undefined reference to
> > > `nf_inq_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:845: undefined reference to
> > > `nf_get_att_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:853: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:856: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_rename_var':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:657: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:662: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:680: undefined reference to
> > > `nf_inq_varid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:670: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:673: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:677: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:689: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:700: undefined reference to
> > > `nf_inq_varid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:694: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:697: undefined reference to
> > > `nf_rename_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:710: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:714: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_def_var':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:562: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:567: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:572: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:576: undefined reference to
> > > `nf_inq_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:585: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:588: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:591: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:594: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:597: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:600: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:603: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:606: undefined reference to
> > > `nf_delete_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:611: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:619: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:628: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:631: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:635: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_rename_dim':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:503: undefined reference to
> > > `nf_rename_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:508: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:514: undefined reference to
> > > `nf_rename_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:517: undefined reference to
> > > `nf_rename_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:520: undefined reference to
> > > `nf_inq_dimname_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:523: undefined reference to
> > > `nf_rename_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:527: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:530: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_def_dim':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:412: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:417: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:422: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:425: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:430: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:433: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:438: undefined reference to
> > > `nf_inq_unlimdim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:443: undefined reference to
> > > `nf_inq_dimlen_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:446: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:453: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:456: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:460: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:463: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:472: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:480: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:483: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_abort':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:304: undefined reference to
> > > `nf_abort_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:309: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:317: undefined reference to
> > > `nf_abort_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:320: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:323: undefined reference to
> > > `nf_delete_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:331: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:336: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:339: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:345: undefined reference to
> > > `nf_abort_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:348: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:351: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:354: undefined reference to
> > > `nf_inq_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:363: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:368: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:376: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:380: undefined reference to
> > > `nf_abort_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:383: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:387: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_sync':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:236: undefined reference to
> > > `nf_sync_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:241: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:246: undefined reference to
> > > `nf_sync_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:254: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:258: undefined reference to
> > > `nf_sync_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:263: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:266: undefined reference to
> > > `nf_sync_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:274: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:277: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:281: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_redef':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:114: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:117: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:122: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:125: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:128: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:131: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:136: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:144: undefined reference to
> > > `nf_inq_varid_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:148: undefined reference to
> > > `nf_put_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:151: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:154: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:158: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:161: undefined reference to
> > > `nf_redef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:164: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:167: undefined reference to
> > > `nf_def_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:171: undefined reference to
> > > `nf_put_att_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:174: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:178: undefined reference to
> > > `nf_put_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:181: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:187: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:190: undefined reference to
> > > `nf_inq_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:197: undefined reference to
> > > `nf_get_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:203: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:207: undefined reference to
> > > `nf_delete_'
> > > test_write.o: In function `test_nf_create':
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:29: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:33: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:37: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:41: undefined reference to
> > > `nf_inq_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:61: undefined reference to
> > > `nf_close_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:69: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/test_write.F:73: undefined reference to
> > > `nf_delete_'
> > > util.o: In function `internal_min':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1292: undefined reference to
> > > `max_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1285: undefined reference to
> > > `max_float_'
> > > util.o: In function `check_file':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1152: undefined reference to
> > > `nf_open_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1159: undefined reference to
> > > `nf_close_'
> > > util.o: In function `check_atts':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1082: undefined reference to
> > > `nf_inq_attname_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1090: undefined reference to
> > > `nf_inq_att_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1119: undefined reference to
> > > `nf_get_att_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1103: undefined reference to
> > > `nf_get_att_text_'
> > > util.o: In function `check_vars':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:991: undefined reference to
> > > `nf_inq_var_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1005: undefined reference to
> > > `nf_inq_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1033: undefined reference to
> > > `nf_get_var1_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1022: undefined reference to
> > > `nf_get_var1_text_'
> > > util.o: In function `check_dims':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:948: undefined reference to
> > > `nf_inq_dim_'
> > > util.o: In function `write_file':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:913: undefined reference to
> > > `nf_create_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:921: undefined reference to
> > > `nf_enddef_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:927: undefined reference to
> > > `nf_close_'
> > > util.o: In function `put_vars':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:881: undefined reference to
> > > `nf_put_vara_text_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:887: undefined reference to
> > > `nf_put_vara_double_'
> > > util.o: In function `put_atts':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:815: undefined reference to
> > > `nf_put_att_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:815: undefined reference to
> > > `nf_put_att_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:800: undefined reference to
> > > `nf_put_att_text_'
> > > util.o: In function `def_vars':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:755: undefined reference to
> > > `nf_def_var_'
> > > util.o: In function `def_dims':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:734: undefined reference to
> > > `nf_def_dim_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:731: undefined reference to
> > > `nf_def_dim_'
> > > util.o: In function `internal_max':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1358: undefined reference to
> > > `max_double_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1321: undefined reference to
> > > `max_schar_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1334: undefined reference to
> > > `max_short_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1344: undefined reference to
> > > `max_int_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1351: undefined reference to
> > > `max_float_'
> > > util.o: In function `internal_min':
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1255: undefined reference to
> > > `min_schar_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1268: undefined reference to
> > > `min_short_'
> > > /usr/local/netcdf-4.1.3/nf_test/util.F:1278: undefined reference to
> > > `min_int_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf_set_base_pe_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__open_mp_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf_inq_base_pe_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__enddef_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__create_mp_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__open_'
> > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__create_'
> > > collect2: ld returned 1 exit status
> > > make[2]: *** [nf_test] Error 1
> > > make[2]: Leaving directory `/usr/local/netcdf-4.1.3/nf_test'
> > > make[1]: *** [check-am] Error 2
> > > make[1]: Leaving directory `/usr/local/netcdf-4.1.3/nf_test'
> > > make: *** [check-recursive] Error 1
> > >
> > >
> > > Please assist me for the same.
> > >
> > >
> > > --
> > >
> > > Keerthi Priya Kasturi
> > > PhD Research Scholar,
> > > Civil Engineering Department
> > > IIT Gandhinagar
> > >
> > >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: XHX-916907
> > Department: Support netCDF
> > Priority: Normal
> > Status: Closed
> >
> >
> 
> 
> --
> 
> Keerthi Priya Kasturi
> PhD Research Scholar,
> Civil Engineering Department
> IIT Gandhinagar
> 
> 
Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: XHX-916907
Department: Support netCDF
Priority: Normal
Status: Closed
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