[netCDF #DDL-847505]: error in make check

Hello,

I can't speak as to why h5import did not build/compile.  Regarding your initial 
bug report, I suspect that you need to specify /usr/local/lib in your 
LD_LIBRARY_PATH when you run 'make check'.  The call would then look as follows:

$ LD_LIBRARY_PATH=/usr/local/lib make check

It is also possible (but I feel less likely) that it is a permission problem; 
do you have read access for libhdf and libhdf_dl?

Please check the permissions and try running make check while specifying 
LD_LIBRARY_PATH and let me know if that works.

Thank you,

-Ward


> Some more INFO.
> 
> 
> This time, I followed
> 
> http://www.unidata.ucar.edu/software/netcdf/docs/netcdf-install/Quick-Instructions.html
> 
> 
> installing  zlib   has no problem
> 
> but installing HDF5 failed at
> Testing h5dump --enable-error-stack -d integer -o out1.bin -b tbinary. PASSED
> Running h5import out1.bin -c out3.h5import -o out1.h5                
> testh5dump.sh: line 913: 
> /home/ucam/Install-file/downloadSoftware/hdf5-1.8.13/tools/h5dump/../h5import/h5import:
>  No such file or directory
> 
> When I checked, it is ture:
> ucam@atcghost:~/Install-file/downloadSoftware/hdf5-1.8.13/tools/h5dump$ ls 
> ../h5import/h5import
> ls: cannot access ../h5import/h5import: No such file or directory
> 
> 
> See attached.
> 
> Any suggestion?
> 
> Best regards
> 
> Xiaofeng
> 
> 
> 
> From: Gao, Xiaofeng (STFC,ROE,UKATC)
> Sent: 02 October 2014 17:32
> To: address@hidden
> Cc: Gao, Xiaofeng (STFC,ROE,UKATC)
> Subject: error in make check
> 
> Hello, Sir /Madam
> 
> I have Debian squeeze OS install on my PC,  and  downloaded
> 
> 
> http://www.hdfgroup.org/ftp/HDF5/current/src/ hdf5-1.8.13.tar.gz
> 
> ftp://ftp.unidata.ucar.edu/pub/netcdf/ netcdf-4.3.1.zip
> 
> 
> 
> https://code.google.com/p/netcdf4-python/wiki/UbuntuInstall
> 
> and built HDF5
> 
> $./configure --prefix=/usr/local --enable-shared --enable-hl
> 
> $make
> 
> $sudo make install
> 
> 
> 
> netCDF4
> 
> $ LDFLAGS=-L/usr/local/lib CPPFLAGS=-I/usr/local/include ./configure 
> --enable-netcdf-4 --enable-dap --enable-shared --prefix=/usr/local
> 
> $ make
> 
> $sudo make install
> 
> 
> 
> 
> 
> All seemed OK.
> 
> 
> 
> But, when I tried make check,  it failed.  See attached.  I check 
> /usr/local/lib, libhdf5_hl.so.8 is there.
> 
> 
> 
> ./tst_h_dimscales4: error while loading shared libraries: libhdf5_hl.so.8: 
> cannot open shared object file: No such file or directory
> 
> FAIL: tst_h_dimscales4
> 
> ================================================
> 
> 26 of 26 tests failed
> 
> Please report to address@hidden<mailto:address@hidden>
> 
> ================================================
> 
> make[2]: *** [check-TESTS] Error 1
> 
> make[2]: Leaving directory 
> `/home/ucam/Install-file/downloadSoftware/netcdf-4.3.1/h5_test'
> 
> make[1]: *** [check-am] Error 2
> 
> make[1]: Leaving directory 
> `/home/ucam/Install-file/downloadSoftware/netcdf-4.3.1/h5_test'
> 
> make: *** [check-recursive] Error 1
> 
> 
> 
> 
> 
> 
> 
> Any suggestion?
> 
> 
> 
> Thanks for your time in advance.
> 
> 
> 
> Best regards
> 
> 
> 
> Xiaofeng
> 
> 
> 
> 
> 
> 
> 
> ==============================================
> Dr.Xiaofeng Gao
> UK Astronomy Technology Centre
> Royal Observatory                  Tel.   : +44 (0)131 668 8233 (direct)
> Blackford Hill                              +44 (0)131 668 8100 (switchboard)
> Edinburgh EH9 3HJ                  Fax.   : +44 (0)131 668 8445
> 
> Science & Technology Facilities Council
> 
> UK                                 E-mail : 
> address@hidden<mailto:address@hidden>
> 
> 
> 
> 
> --
> Scanned by iCritical.
> 
> 
> 


Ticket Details
===================
Ticket ID: DDL-847505
Department: Support netCDF
Priority: Normal
Status: Closed