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[netCDF #TJB-572859]: Trouble with building parallel netcdf

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  • Subject: [netCDF #TJB-572859]: Trouble with building parallel netcdf
  • Date: Thu, 17 Apr 2014 10:43:52 -0600
Hi John,

I'm finding a couple of issues in the config.log; thank you very much for 
providing it. I apologize in the delay responding to you.

 I had expected to see a line in the config.log telling me that the hdf5 
library was found, but could not be linked against due to an unmet downstream 
dependency, as is often the case.  However, your config.log indicates that it 
simply cannot find a libhdf5 library at all.

As Russ pointed out, the difference between '-I' and '-L' in the LDFLAGS 
setting is fairly important.  It appears that it was not corrected for this 
configuration attempt; if you search the config.log for 
'-I/soft/hdf5/1.8.12-parallel/../lib' you will find that it is still treating 
the directory as an include directory, not a link directory.  If you correct 
this so that it uses -L, and then confirm in your config.log that it is in fact 
using -L, I am hopeful that it will find the hdf5 library.  If it does not, 
please send me the new config.log and I will see what new information it 
provides.

Thank you, have a good day,

-Ward


> While true I still get the same error on configure with the corrected LDFLAGS.
> 
> - JB
> 
> 
> 
> On Tue, Apr 15, 2014 at 3:50 PM, Unidata netCDF Support
> <address@hidden> wrote:
> > Also, I noticed a typo in your environment settings.  You have:
> >
> >> > [wilshire@blogin1 1.8.12-parallel]$ env
> >> > MODULE_VERSION_STACK=3.2.9
> >> > LDFLAGS=-I/soft/hdf5/1.8.12-parallel/intel-13.1/mvapich2-1.9/lib
> >
> > which should instead be:
> >
> >     LDFLAGS=-L/soft/hdf5/1.8.12-parallel/intel-13.1/mvapich2-1.9/lib
> >
> > ("-L" instead of "-I")
> >
> > --Russ
> >
> 
> >
> > Ticket Details
> > ===================
> > Ticket ID: TJB-572859
> > Department: Support netCDF
> > Priority: Normal
> > Status: Closed
> >
> 
> 

Ticket Details
===================
Ticket ID: TJB-572859
Department: Support netCDF
Priority: Normal
Status: Closed