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[netCDF #UYZ-467196]: install netcdf-4.1.3

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  • Subject: [netCDF #UYZ-467196]: install netcdf-4.1.3
  • Date: Thu, 05 Dec 2013 14:59:07 -0700
Zeinab,

>  Thank a lot, I did you said, but there is another error :
> configure: error: Can't find or link to the z library. Turn off netCDF-4 and 
> opendap with --disabled-netcdf-4 --disable-dap, or see config.log for errors.
> The config.log and the error message are attached, also I reinstall the 
> fedora 18 instead of fedora19
> and use pgi12.10, zlib-1.2.8 and hdf5-1.8.11.

Hmm, I thought you had solved this problem by installing zlib in /usr/lib64 or
someplace else that is searched by default.  If instead you have installed
libz.a or libz.so in location "/foo/bar/lib/", then you need to use

   ./configure --with-zlib=/foo/bar/lib [... other options]

in your configure script options (this works with netCDF-4.1.3, but later
versions instead use CPPFLAGS and LDFLAGS environment variables to specify
where to look for libraries, such as

   CPPFLAGS="-I/foo/bar/include" LDFLAGS="-L/foo/bar/lib" ./configure ...

--Russ

> Hi Zeinab,
> 
> 
> > I try to install netcdf-4.1.3 with pgi12.10, zlib-1.2.8 and hdf5-1.8.11, 
> > but I get this error (configure: error: Fortran could not compile .f90 
> > files)
> 
> >
> 
> > I attached the file of log.config, and the message error in file of 
> > netcdf_error.
> 
> > I use fedora 19.
> 
> > please, could you help me ?
> 
> 
> Your config.log contains:
> 
> 
>   configure:6437: finding Fortran compiler (will not be used if Fortran API 
> is not desired)
> 
>   configure:6545: checking for Fortran compiler version
> 
>   configure:6554: pgf90 --version >&5
> 
>   ./configure: line 6556: pgf90: command not found
> 
> 
> The problem is that you have specified the Fortran compiler using "FC=pgf90", 
> but pgf90 is not
> 
> found on your PATH.  I see that your PATH includes the directory
> 
> 
>   /opt/pgi/linux86-64/12.8/bin/
> 
> 
> Is pgf90 in that directory?  If so, is it executable?  If not, have you 
> installed pgf90 somewhere
> 
> else that's not in your search PATH?
> 
> 
> Once the problem of finding the pgf90 compiler is solved, you should set the 
> PATH environment
> 
> variable to include the proper directory, and rerun the configure script to 
> make sure it completes.
> 
> 
> --Russ
> 
> 
> Russ Rew                                         UCAR Unidata Program
> 
> address@hidden                      http://www.unidata.ucar.edu
> 
> 
> 
> 
> Ticket Details
> 
> ===================
> 
> Ticket ID: UYZ-467196
> 
> Department: Support netCDF
> 
> Priority: Normal
> 
> Status: Closed
> 

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: UYZ-467196
Department: Support netCDF
Priority: Normal
Status: Closed