[netCDF #PSS-815442]: error building netcdf 4.3.0 with gfortran 4.7.2

Hans,

> Thank you for your response. We followed the instructions you described with 
> as result the same error as mentioned before.
> I also noticed that I sent you the wrong definitions of the environmental 
> variables but hereby I sent you  in detail the steps we followed;
> 1. First the gcc build.
> 
> cd /opt/netcdf-work/netcdf-4.3.0
> make distclean
> ./configure --prefix=/opt/netcdf-4.3.0-gf --disable-netcdf-4 --disable-dap
> make check
> make install
> 
> The result is successfull.  The following files are now created;
> 
> /opt/netcdf-4.3.0-gf/bin:
> drwxr-xr-x. 2 root root   4096 Jun 26 15:13 .
> drwxr-xr-x. 6 root root   4096 Jun 26 15:13 ..
> -rwxr-xr-x. 1 root root   5006 Jun 26 15:13 nc-config
> -rwxr-xr-x. 1 root root 118026 Jun 26 15:13 nccopy
> -rwxr-xr-x. 1 root root 221658 Jun 26 15:13 ncdump
> -rwxr-xr-x. 1 root root 679918 Jun 26 15:13 ncgen
> -rwxr-xr-x. 1 root root 204029 Jun 26 15:13 ncgen3
> 
> /opt/netcdf-4.3.0-gf/include:
> total 68
> drwxr-xr-x. 2 root root  4096 Jun 26 15:13 .
> drwxr-xr-x. 6 root root  4096 Jun 26 15:13 ..
> -rw-r--r--. 1 root root 58489 Jun 26 15:13 netcdf.h
> 
> /opt/netcdf-4.3.0-gf/lib:
> total 4732
> drwxr-xr-x. 3 root root    4096 Jun 26 15:13 .
> drwxr-xr-x. 6 root root    4096 Jun 26 15:13 ..
> -rw-r--r--. 1 root root 2799068 Jun 26 15:13 libnetcdf.a
> -rwxr-xr-x. 1 root root     945 Jun 26 15:13 libnetcdf.la
> lrwxrwxrwx. 1 root root      18 Jun 26 15:13 libnetcdf.so -> 
> libnetcdf.so.7.2.0
> lrwxrwxrwx. 1 root root      18 Jun 26 15:13 libnetcdf.so.7 -> 
> libnetcdf.so.7.2.0
> -rwxr-xr-x. 1 root root 2026296 Jun 26 15:13 libnetcdf.so.7.2.0
> drwxr-xr-x. 2 root root    4096 Jun 26 15:13 pkgconfig
> 
> 
> 2. The fortran build
> 
> CPPFLAGS=-I/opt/netcdf-4.3.0-gf/include;export CPPFLAGS
> LDFLAGS=-L/opt/netcdf-4.3.0-gf/lib;export LDFLAGS
> export LD_LIBRARY_PATH=/opt/netcdf-4.3.0-gf/lib:${LD_LIBRARY_PATH}
> 
> cd netcdf-fortran-4.2
> make distclean
> ./configure --prefix=/opt/netcdf-4.3.0-gf
> make check
> 
> which results in the error :
> ncfortran.h:24:42: fatal error: NF_INT_IS_C_... not defined: No such
> 
> We would really appreciate your advice in this case.

I don't see the cause of the error, so will need more information.  Could
you please send the complete config.log file, as well as the file
fortran/nfconfig.inc that was generated when the configure script was run?

Thanks!

--Russ

> -----Original Message-----
> From: Unidata netCDF Support [mailto:address@hidden]
> Sent: Tuesday, June 25, 2013 9:26 PM
> To: Hans Malschaert
> Cc: address@hidden
> Subject: [netCDF #PSS-815442]: error building netcdf 4.3.0 with gfortran 4.7.2
> 
> Hi Hans,
> 
> 
> > We met an error message building netcdf 4.3.0 in a Centos 6.2 environment 
> > with a gfortran 4.7.2 compiler.
> >
> > Could you give some advice to solve the problem?
> 
> First, you'll have trouble building netCDF 4.3.0 with a Fortran compiler, as 
> it is only a C library.  You should be building it with gcc rather than 
> gfortran, for example, according to these instructions:
> 
> http://www.unidata.ucar.edu/netcdf/docs/building.html
> 
> Once you have the netCDF C library built and installed, you can get and build 
> the separate netCDF Fortran 4.2 libraries by following these instructions:
> 
> http://www.unidata.ucar.edu/netcdf/docs/netcdf-fortran-install.html
> 
> --Russ
> 
> > The environment variables are set as follows ;
> > LDFLAGS=-L/opt/shared/tools/gcc/4.7.2/rtf/lib
> > CPPFLAGS=-I/opt/shared/tools/gcc/4.7.2/rtf/include
> > -I/opt/netcdf-4.3.0-gf/include
> > LD_LIBRARY_PATH=/opt/shared/tools/gcc/4.7.2/rtf/lib
> >
> > ./configure --prefix=/opt/netcdf-4.3.0-gf make check
> >
> > which generate the following error..
> > Making check in fortran
> > make[1]: Entering directory `/opt/netcdf-4.1.3/fortran'
> > echo '!     NetCDF-3.' > netcdf.inc
> > cat ../fortran/netcdf3.inc >> netcdf.inc echo >> netcdf.inc
> > echo '!     NetCDF-2.' >> netcdf.inc
> > cat ../fortran/netcdf2.inc >> netcdf.inc make  check-am
> > make[2]: Entering directory `/opt/netcdf-4.1.3/fortran'
> > depbase=`echo fort-attio.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
> > /bin/sh ../libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..  
> > -I../include     -g -O2 -MT fort-attio.lo -MD -MP -MF $depbase.Tpo -c -o 
> > fort-attio.lo fort-attio.c &&\
> > mv -f $depbase.Tpo $depbase.Plo
> > libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -I../include -g -O2
> > -MT fort-attio.lo -MD -MP -MF .deps/fort-attio.Tpo -c fort-attio.c  -fPIC 
> > -DPIC -o .libs/fort-attio.o In file included from fort-attio.c:8:0:
> > ncfortran.h:24:42: fatal error: NF_INT_IS_C_... not defined: No such
> > file or directory compilation terminated.
> > make[2]: *** [fort-attio.lo] Error 1
> > make[2]: Leaving directory `/opt/netcdf-4.1.3/fortran'
> > make[1]: *** [check] Error 2
> > make[1]: Leaving directory `/opt/netcdf-4.1.3/fortran'
> > make: *** [check-recursive] Error 1
> >
> >
> > Best regards,
> > Hans Malschaert
> > System/Network administrator
> >
> > Information and Presentation Centre (IPC) Royal Netherlands Institute
> > for Sea Research (Koninklijk Nederlands Instituut voor Zeeonderzoek)
> > Landsdiep 4 -  1797 SZ Den Hoorn  - Netherlands
> > *  mailto: address@hidden<mailto:address@hidden>
> > ? tel   : +31 222 369377
> > ? fax   : +31 222 319674
> > *   ftp    : http://nioz.wetransfer.com<http://nioz.wetransfer.com/>
> > *   web : http://www.nioz.nl<http://www.nioz.nl/>
> > [Description: cid:image001.gif@01CBEAF1.BA49FCA0]
> >
> >
> >
> Russ Rew                                         UCAR Unidata Program
> address@hidden                      http://www.unidata.ucar.edu
> 
> 
> 
> Ticket Details
> ===================
> Ticket ID: PSS-815442
> Department: Support netCDF
> Priority: Normal
> Status: Closed
> 
> 

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: PSS-815442
Department: Support netCDF
Priority: Normal
Status: Closed