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[netCDF #THZ-511849]: netcdf 4.1.3 compiling

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  • Subject: [netCDF #THZ-511849]: netcdf 4.1.3 compiling
  • Date: Tue, 04 Sep 2012 14:11:48 -0600
> Full Name: Kopinjol Baishya
> Email Address: address@hidden
> Organization: University of illinois
> Package Version:
> Operating System:
> Hardware:
> Description of problem: Hi,
> 
> I am running into a similar problem with compiling netcdf-4.1.3. Thr
> library compiles very well. But when i type make check I get an error.
> 
> Here is my configure line:
> 
> ./configure --prefix=/home/kbaish2/DFT-GW-Codes/netcdf-4.1.3 FC=gfortran44 
> CC=gcc44 --with-zlib=/home/kbaish2/DFT-GW-Codes/zlib-1.2.7 --disable-dap 
> --disable-netcdf-4
> 
> And Here is the error message I get:
> 
> make[1]: Entering directory `/home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test'
> make nf_test tst_f77_v2 ftest tst_f90
> make[2]: Entering directory `/home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test'
> /bin/sh ../libtool --tag=F77 --mode=link gfortran44 -I../fortran -I../include 
> -I../f90 -g -O2 -L/home/kbaish2/DFT-GW-Codes/hdf5-1.8.9/lib -o nf_test 
> test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o util.o 
> fortlib.o ../fortran/libnetcdff.la -lm -lcurl
> libtool: link: gfortran44 -I../fortran -I../include -I../f90 -g -O2 -o 
> .libs/nf_test test_get.o test_put.o nf_error.o nf_test.o test_read.o 
> test_write.o util.o fortlib.o -L/home/kbaish2/DFT-GW-Codes/hdf5-1.8.9/lib 
> ../fortran/.libs/libnetcdff.so 
> /home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/liblib/.libs/libnetcdf.so -lm -lcurl 
> -Wl,-rpath -Wl,/home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/lib
> test_get.o: In function `test_nf_get_att_double_':
> /home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test/test_get.F:5511: undefined 
> reference to `nf_open_'
> /home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test/test_get.F:5521: undefined 
> reference to `nf_get_att_double_'
> /home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test/test_get.F:5526: undefined 
> reference to `nf_get_att_double_'
> /home/kbaish2/DFT-GW-Codes/netcdf-4.1.3/nf_test/test_get.F:5529: undefined 
> reference to `nf_get_att_double_'

Could you try a clean build again, this time specifying the environment
variable CFLAGS to include -DgFortran before you run the configure script?

Please let us know if that fixes things.  Thanks.

--Russ

> I have also checked that I have used same compilers for hdf5 and
> netcdf.4.1.3 and the compilers are the same gcc44 and gfortran44.
> 
> I would really appreciate any help.
> 
> Thanks in advance.
> kopinjol
> 
> 

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: THZ-511849
Department: Support netCDF
Priority: Normal
Status: Closed