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[netCDF #GOJ-472807]: Error: "'H5F_LIBVER_18' undeclared"

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  • Subject: [netCDF #GOJ-472807]: Error: "'H5F_LIBVER_18' undeclared"
  • Date: Fri, 27 Jan 2012 14:09:51 -0700
Yay! Have fun netCDF'ing!

Sean

> Dear Sean,
> 
> thank you very much for response. It works now =)
> 
> Sincerly,
> Birgit
> ________________________________________
> Von: Unidata netCDF Support [address@hidden]
> Gesendet: Freitag, 20. Januar 2012 21:35
> Bis: Dölle, Birgit
> Cc: address@hidden
> Betreff: [netCDF #GOJ-472807]: Error: "'H5F_LIBVER_18' undeclared"
> 
> Greetings Birgit,
> 
> I think that what you are seeing is that netCDF cannot find your HDF5 
> library. Try specifying the path to the HDF5 and zlib libraries using the 
> CPPFLAGS and LDFLAGS variables when you run configure, like so (note that we 
> no longer use the --with-zlib, or other --with-* flags with configure - it's 
> all done through the CPPFLAGS and LDFLAGS):
> 
> CPPFLAGS="-I/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5/include 
> -I/home/learjet/doel_bi/local/netcdfWithHdf5/hdf5-1.8.8/include" 
> LDFLAGS="-L/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5/lib 
> -L/home/learjet/doel_bi/local/netcdfWithHdf5/hdf5-1.8.8/lib" ./configure 
> --prefix=/home/learjet/doel_bi/local/netcdfWithHdf5/netcdf-4.1.3 
> --enable-netcdf4  --enable-large-file-tests
> 
> Also, be sure to run
> 
> make disclean
> 
> before rerunning configure.
> 
> Please let me know if this work for you!
> 
> Cheers,
> 
> Sean
> 
> > Dear Ladies and Gentlemen,
> >
> > i am a student in German Aerospace Centre. I tried to install netcdf
> > with hdf5 and zlib, but it doesn't work and i have no idea, what to
> > do. The installing process of netcdf fails.
> >
> > My operation system is SUSE in version 11.2.
> >
> >
> > In the following i describe, what i have done:
> > Download zlib-1.2.5
> > Download hdf5-1.8.8
> > Download netcdf-4.1.3
> >
> > The extracted directorys are in "/home/learjet/doel_bi/local/".
> > The installation of all should be in 
> > "/home/learjet/doel_bi/local/netcdfWithHdf5".
> >
> > ##################################################
> > In /home/learjet/doel_bi/local/zlib-1.2.5
> > ##################################################
> > ./configure
> > --prefix=/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5
> > make
> > make install
> > ##################################################
> > In /home/learjet/doel_bi/local/hdf5-1.8.8
> > ##################################################
> > ./configure
> > --with-zlib=/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5
> > --prefix=/home/learjet/doel_bi/local/netcdfWithHdf5/hdf5-1.8.8
> > make
> > make install
> >
> > Then i exported the LD_LIBRARY_PATH:
> > export 
> > LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5/lib
> > export 
> > LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/learjet/doel_bi/local/netcdfWithHdf5/hdf5-1.8.8/lib
> >
> > ##################################################
> > In /home/learjet/doel_bi/local/netcdf-4.1.3
> > ##################################################
> > ./configure
> > --prefix=/home/learjet/doel_bi/local/netcdfWithHdf5/netcdf-4.1.3
> > --enable-netcdf4
> > --with-zlib=/home/learjet/doel_bi/local/netcdfWithHdf5/zlib-1.2.5
> > --enable-large-file-tests
> >
> > While running the Makefile this error message appears:
> > nc4file.c: In function 'nc4_create_file':
> > nc4file.c:272: error: 'H5F_LIBVER_18' undeclared (first use in this 
> > function)
> > nc4file.c:272: error: (Each undeclared identifier is reported only once
> > nc4file.c:272: error: for each function it appears in.)
> > make[2]: *** [libnetcdf4_la-nc4file.lo] Error 1
> >
> > What i have to do, to run the Makefile successfully?
> > Thanks for your help.
> >
> > Yours sincerely,
> > Birgit Dölle
> >
> >
> 
> 
> Ticket Details
> ===================
> Ticket ID: GOJ-472807
> Department: Support netCDF
> Priority: Normal
> Status: Open
> 
> 
> 


Ticket Details
===================
Ticket ID: GOJ-472807
Department: Support netCDF
Priority: Normal
Status: Closed