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[netCDF #ODR-209369]: tst_h_vars fails in netcdf-4.1.3

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  • Subject: [netCDF #ODR-209369]: tst_h_vars fails in netcdf-4.1.3
  • Date: Mon, 09 Jan 2012 16:09:23 -0700
Sourish,

> Ah good, thanks. I recompiled HDF5 with zlib, and now there's a new
> error in netcdf make check:
> 
> libtool: link: gfortran -I../fortran -I../f90 -I../f90 -I../include -g
> -O2 -o .libs/f90tst_vars4 f90tst_vars4.o  ../fortran/.libs/libnetcdff.so
> /home/i/Downloads/netcdf-4.1.3/liblib/.libs/libnetcdf.so -lsz -lhdf5_hl
> -lhdf5 -lm -lz
> gfortran  -I../fortran -I../f90 -I../f90 -I../include   -g -O2 -c -o
> f90tst_vars2.o  f90tst_vars2.f90
> f90tst_vars2.f90:37.34:
> 
> integer, parameter :: CACHE_SIZE = 8, CACHE_NELEMS = 571,
> CACHE_PREEMPTION =
> 1
> Error: Symbol 'cache_size' at (1) already has basic type of INTEGER
> f90tst_vars2.f90:86.37:
> 
> CACHE_NELEMS, CACHE_PREEMPTION))
> 1
> Error: Symbol 'cache_preemption' at (1) has no IMPLICIT type
> f90tst_vars2.f90:77.13:
> 
> call check(nf90_def_var(ncid, VAR5_NAME, NF90_INT, dimids, varid5,
> chunksizes
> 1
> Error: There is no specific function for the generic 'nf90_def_var' at (1)
> make[2]: *** [f90tst_vars2.o] Error 1
> make[2]: Leaving directory `/home/i/Downloads/netcdf-4.1.3/nf_test'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory `/home/i/Downloads/netcdf-4.1.3/nf_test'
> make: *** [check-recursive] Error 1

Hmm, you must have built with szip enabled, which builds a test program
that's not usually built and that we didn't test on gfortran, 
f90tst_vars2.f90.  It has some lines longer than gfortran handles by
default.

Could you download this newer version of that file, taken from the latest
release of netcdf-fortran-4.2, and use it to replace nf_test/f90tst_vars2.f90
in your source code tree, then try "make check again"

  
http://svn.unidata.ucar.edu/repos/netcdf-fortran/trunk/nf_test/f90tst_vars2.f90

If you run into more problems like this, I'd recommend using the separate 
Fortran
release that's later than what's in netCDF-4.1.3, as announced here:

  
http://www.unidata.ucar.edu/mailing_lists/archives/netcdfgroup/2011/msg00370.html

Thanks.

--Russ

> On 01/08/2012 05:34 AM, Unidata netCDF Support wrote:
> > This is telling you that the HDF5 library you have was not built with zlib,
> > or else the ZLIB library is missing on your machine.
> >
> > =Dennis Heimbigner
> >  Unidata
> >
> > =Dennis Heimbigner
> >   Unidata
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: ODR-209369
> > Department: Support netCDF
> > Priority: Normal
> > Status: Closed
> >
> 
> 

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: ODR-209369
Department: Support netCDF
Priority: Normal
Status: Closed