[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[netCDF #RLJ-781337]: urgent!!! Error when building the NetCDF

This archive contains answers to questions sent to Unidata support through mid-2025. Note that the archive is no longer being updated. We provide the archive for reference; many of the answers presented here remain technically correct, even if somewhat outdated. For the most up-to-date information on the use of NSF Unidata software and data services, please consult the Software Documentation first.

  • Subject: [netCDF #RLJ-781337]: urgent!!! Error when building the NetCDF
  • Date: Thu, 03 Nov 2011 10:29:30 -0600
Greetings Feng,

You may want to take a look at Ubuntu's netCDF package that lives in Universe - 
it's 4.1.1, and you can get it through apt-get. Another option would be to use 
the HDF5-1.8.5-patch1 version of hdf5 lib when building netCDF4.1.1. That 
version of hdf5 can be found on the hdf website, or here:

ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4/hdf5-1.8.5-patch1.tar.gz

Let me know if either of these fix your issue. Cheers!

Sean


> Hi Sean,
> 
> Thanks a lot for your suggestion. The thing is I got a software with binary
> file which is required libnetcdf.so.6. For the newer version, NetCDF 4.1.2
> or .3 have libnetcdf.so.7 or higher. Is it possible that I compile the
> NetCDF 4.1.3 and just change the name of libnetcdf.so.7 to libnetcdf.so.6?
> 
> Thanks a lot!
> 
> Cheers,
> Feng
> 
> 
> 
> 
> address@hidden> wrote:
> 
> > Greetings Feng,
> >
> > The first thing I would recommend is that you try to the 4.1.3 release of
> > netCDF (
> > http://www.unidata.ucar.edu/downloads/netcdf/netcdf-4_1_3/index.jsp).
> > There have been some reported issues with HDF5-1.8.6 and netCDF 4.1.1. If
> > moving to 4.1.3 does not fix the error, please send me your configure and
> > make logs.
> >
> > Cheers!
> >
> > Sean
> >
> > > Hi Sean,
> > >
> > > Thanks very much for your reply. I used HDF5-1.8.6 and tried complied
> > them
> > > on Ubuntu 11.04 32-bits machine.
> > >
> > > Cheers,
> > > Feng
> > >
> > >
> > > address@hidden> wrote:
> > >
> > > > Greetings Feng,
> > > >
> > > > Which version of HDF5 are you using? I checked your output file, but
> > it's
> > > > only the log of the test suite and it does not show the version.
> > > >
> > > > Cheers,
> > > >
> > > > Sean
> > > >
> > > > > Hi,
> > > > >
> > > > > I have built zlib and hdf5 at first. However, I have got an error
> > while
> > > > > building NetCDF. I have attached the log file of building. Could
> > anyone
> > > > > helped me have a look quickly? Thanks a lot. The error is shown as
> > > > follow.
> > > > >
> > > > > *** Checking HDF5 variable functions.
> > > > > *** Checking HDF5 boolean variables...ok.
> > > > > *** Checking HDF5 variable with unlimited dimension...ok.
> > > > > *** Checking HDF5 deflate filter setting and getting...10 failures
> > > > > *** Checking HDF5 deflate, fletcher32, shuffle filter setting and
> > > > > getting...11 failures
> > > > > *** Checking HDF5 endianness control...32 failures
> > > > > 53 errors detected! Sorry!
> > > > > FAIL: tst_h_vars
> > > > >
> > > > > Regards,
> > > > > Feng
> > > > >
> > > > >
> > > >
> > > >
> > > > Ticket Details
> > > > ===================
> > > > Ticket ID: RLJ-781337
> > > > Department: Support netCDF
> > > > Priority: Normal
> > > > Status: Open
> > > >
> > > >
> > >
> > >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: RLJ-781337
> > Department: Support netCDF
> > Priority: Normal
> > Status: Open
> >
> >
> 
> 


Ticket Details
===================
Ticket ID: RLJ-781337
Department: Support netCDF
Priority: Normal
Status: Open