[netCDF #LYS-508051]: netcdf support request

Sorry Burt, that link should be:

http://software.intel.com/sites/products/documentation/hpc/composerxe/en-us/fortran/lin/index.htm

Sean

> No problem Burt - glad it worked! By the way, the online docs for Intel 
> Fortran XE can be found here (may come in handy in the future):
> 
> http://software.intel.com/sites/products/documentation/hpc/composerxe/en-us/mklxe/mkl_userguide_lnx/index.htm
> 
> Sean
> 
> > Sean,
> >
> > That did it! make check and install went well.  Thank very much for your 
> > help today.
> >
> > BURT
> >
> > -----Original Message-----
> > From: Unidata netCDF Support [mailto:address@hidden]
> > Sent: Thursday, May 26, 2011 4:07 PM
> > To: Burt Chesterfield
> > Cc: address@hidden
> > Subject: [netCDF #LYS-508051]: netcdf support request
> >
> > Burt,
> >
> > I've checked out the docs for Intel Fortran XE and it looks like they've 
> > included a script to set everything up for you (I would go ahead and undo 
> > the changes to /etc/ld.so.conf before moving forward - don't forget to 
> > execute ldconfig after you make changes). There should be a script provided 
> > by Intel for bash and csh to setup your environment. For bash, use:
> >
> > source /opt/intel/bin/compilervars.sh intel64
> >
> > or for csh:
> >
> > source /opt/intel/bin/compilervars.csh intel64
> >
> > Let me know how it turns out :-)
> >
> > Sean
> >
> >
> > > Sean,
> > >
> > > I do have root access so I sourced the file like you suggested but make 
> > > check still complains.  I have ifort version 12.0.3 and it does indeed 
> > > live in /opt/intel.  The only thing is there are multiple directories 
> > > that contain the library files listed in the make check complaint.
> > >
> > >
> > >
> > > My /opt/intel contains
> > >
> > > ActivationTool  composerxe   composerxe-2011.3.174  lib       man
> > >
> > > bin             composerxe-2011  include                licenses  mkl
> > >
> > >
> > >
> > > Composerxe, composerxe-2011.3.174, and composerxe-2011 all have the 
> > > lib/intel64 directories with libraries in them as well as that lib 
> > > directory in /opt/intel itself.  Should I add all the directories and 
> > > ‘make’ will keep looking until it finds the correct one or should I 
> > > source them one by one (I have already tried it with 
> > > /opt/intel/composerxe/lib/intel64) ?  I hope I explained the situation 
> > > clearly for you.
> > >
> > >
> > >
> > > -----Original Message-----
> > > From: Unidata netCDF Support [mailto:address@hidden]
> > > Sent: Thursday, May 26, 2011 2:46 PM
> > > To: Burt Chesterfield
> > > Cc: address@hidden
> > > Subject: [netCDF #LYS-508051]: netcdf support request
> > >
> > >
> > >
> > > Hi Burt,
> > >
> > >
> > >
> > > It looks like you will need to add the path to your Intel Fortran libs to 
> > > /etc/ld.so.conf (you will need root access or sudo privileges to do 
> > > this). Check to see if /opt/intel/Compiler exists, and if so, cd down in 
> > > the directory until you hit lib/intel64; this is the path you will need 
> > > to add to /etc/ld.so.conf. A possible example of what this path will look 
> > > like is:
> > >
> > >
> > >
> > > /opt/intel/Compiler/11.1/056/lib/intel64
> > >
> > >
> > >
> > > Once you've added the path, execute the command
> > >
> > >
> > >
> > > ldconfig
> > >
> > >
> > >
> > > to make sure the changes to /etc/ld.so.conf are used.
> > >
> > >
> > >
> > > If you don't have root access, try to set the LD_LIBRARY_PATH 
> > > environmental variable to include the above path.
> > >
> > >
> > >
> > > Once ifort knows where the Intel Fortran libs live, try to recompile 
> > > netCDF and see what make check tells you.
> > >
> > >
> > >
> > > Cheers,
> > >
> > >
> > >
> > > Sean
> > >
> > >
> > >
> > >
> > >
> > > > Thanks for the reply Sean here is ldconfig output....
> > >
> > > >
> > >
> > > > -----Original Message-----
> > >
> > > > From: Unidata netCDF Support [mailto:address@hidden]
> > >
> > > > Sent: Thursday, May 26, 2011 12:49 PM
> > >
> > > > To: Burt Chesterfield
> > >
> > > > Cc: address@hidden
> > >
> > > > Subject: [netCDF #LYS-508051]: netcdf support request
> > >
> > > >
> > >
> > > > Greetings Burt!
> > >
> > > >
> > >
> > > > It looks like the compiler cannot find your Intel Fortran libs. These 
> > > > typically live under /opt/intel/Compiler/<version>/lib. If you run the 
> > > > command
> > >
> > > >
> > >
> > > > ldconfig -v
> > >
> > > >
> > >
> > > > on the command line, does the path to the Intel libs show up?
> > >
> > > >
> > >
> > > > Cheers,
> > >
> > > >
> > >
> > > > Sean Arms
> > >
> > > >
> > >
> > > >
> > >
> > > > Burt Chesterfield Posted on: 20110526.1005 MDT 
> > > > ================================================================
> > >
> > > > Good Day,
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > > The attached file is an excerpt from a make check of a netcdf 4.1.2 
> > > > installation on a linux system (opensuse 11.4 64bit).  Please let me 
> > > > know if I need to provide more information for interpretation.
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > > Thanks,
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > > Burt Chesterfield
> > >
> > > >
> > >
> > > > Infrastructure Specialist
> > >
> > > >
> > >
> > > > University of the Virgin Islands
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > > Ticket Details
> > >
> > > > ===================
> > >
> > > > Ticket ID: LYS-508051
> > >
> > > > Department: Support netCDF
> > >
> > > > Priority: Normal
> > >
> > > > Status: Open
> > >
> > > >
> > >
> > > >
> > >
> > >
> > >
> > >
> > >
> > > Ticket Details
> > >
> > > ===================
> > >
> > > Ticket ID: LYS-508051
> > >
> > > Department: Support netCDF
> > >
> > > Priority: Normal
> > >
> > > Status: Open
> > >
> > >
> > >
> > >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: LYS-508051
> > Department: Support netCDF
> > Priority: Normal
> > Status: Open
> >
> >
> 


Ticket Details
===================
Ticket ID: LYS-508051
Department: Support netCDF
Priority: Normal
Status: Closed