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[netCDF #EAD-374279]: HDF5 "make check" error

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  • Subject: [netCDF #EAD-374279]: HDF5 "make check" error
  • Date: Thu, 10 Mar 2011 20:49:56 -0700
Hi Carlos,

> hello we are students from Florida International University, and we are
> trying to install HDF5 1.8.5 and NETCDF 4.1.1 to run WRF in parallel with a
> 3 node cluster. So far we have the MPICH2 installed and functioning in our
> shared directory "/mirror/clust/localBin." We have successfully booted all
> nodes and ran examples from the MPICH2 example folder.  Also we are
> utilizing the Intel compilers icc, icpc, ifort. We have also installed ZLIB
> and ran "make check" with no problems. Now we are trying to install HDF5 in
> the same directory "/mirror/clust/localBin" and the make check gave us the
> attached errors at the end (all previous tests passed). The following are
> the commands we used to install ZLIB and the HDF5:
> 
> ZLIB,
> 
> ./configure --prefix=/mirror/clust/localBin
> make check install
> 
> then for the HDF5,
> 
> CC=mpicc ./configure --enable-parallel --prefix=/mirror/clust/localBin
> --with-zlib=/mirror/clust/localBin --disable-shared
> make
> make check <--this is where we get the error
> 
> do we need to "mpdboot" all nodes before the installation??

I hope you got an answer from address@hidden, because we don't know the 
answer.

--Russ

Russ Rew                                         UCAR Unidata Program
address@hidden                      http://www.unidata.ucar.edu



Ticket Details
===================
Ticket ID: EAD-374279
Department: Support netCDF
Priority: Normal
Status: Closed