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Re: [netcdfgroup] problem during ./configuration
- Subject: Re: [netcdfgroup] problem during ./configuration
- Date: Thu, 27 May 2010 10:39:17 -0600
Hi,
I've forwarded this to address@hidden, which is a
better address for specific questions such as this.
The netcdfgroup mailing list is intended for announcements to the netCDF
user community and for general discussions of netCDF-related issues.
Thanks.
--Russ
> --===============0363371648==
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> Hi Ted,
>
> Thanks for your message. I went back to config.log and got this:
>
> 276 PGF90-S-0034-Syntax error at or near end of line (conftest.F: 3)
> 277 0 inform, 0 warnings, 1 severes, 0 fatal for main
> 278 configure:4765: $? =3D 2
> 279 configure: failed program was:
> 280 | program main
> 281 | #ifndef __GNUC__
> 282 | choke me
> 283 | #endif
> 284 |
> 285 | end
>
> 357 configure:5582: pgCC -c -DNDEBUG -DpgiFortran -D_LARGEFILE_SOURCE
> conftest.cpp >&5
> 358 "conftest.cpp", line 17: error: identifier "choke" is undefined
> 359 choke me
> 360 ^
> 361
> 362 "conftest.cpp", line 17: warning: variable "me" was declared but never
> 363 referenced
> 364 choke me
> 365 ^
> 366
> 367 1 error detected in the compilation of "conftest.cpp".
>
> 713 configure:9380: pgCC -E -DNDEBUG -DpgiFortran -D_LARGEFILE_SOURCE
> conftest.cpp
> 714 "conftest.cpp", line 23: error: could not open source file
> "ac_nonexistent.h"
> 715 #include <ac_nonexistent.h>
> 716 ^
> 717
> 718 1 error detected in the compilation of "conftest.cpp".
> 719 configure:9386: $? =3D 2
> 720 configure: failed program was:
>
> 748 "conftest.cpp", line 23: error: could not open source file
> "ac_nonexistent.h"
> 749 #include <ac_nonexistent.h>
> 750 ^
> 751
> 752 1 error detected in the compilation of "conftest.cpp".
> 753 configure:9491: $? =3D 2
> 754 configure: failed program was:
> 755 | /* confdefs.h. */
>
> 1050 configure:22807: error: Could not compile conftest.f
>
> 1350 configure: exit 1
>
> But I just download the whole thing...
>
> Hongyan
> On Thu, May 27, 2010 at 12:13 PM, Ted Mansell <address@hidden> wrote:
>
> > Have you checked in the config.log output to see what the full error is?
> > There is some issue with the fortran compiler, which could be a number o=
> f
> > things.
> >
> > -- Ted
> >
> >
> > On May 27, 2010, at 11:09 AM, H.Dang wrote:
> >
> > Hello,
> >>
> >> I met a problem when ./configure --prefix=3D...
> >>
> >> checking for /usr/bin/nm... /usr/bin/nm -B
> >> checking nm flags...
> >> checking for C-equivalent to Fortran routine "SUB"...
> >> pgf90 9.0-4 64-bit target on x86-64 Linux -tp nehalem-64
> >> Copyright 1989-2000, The Portland Group, Inc. All Rights Reserved.
> >> Copyright 2000-2009, STMicroelectronics, Inc. All Rights Reserved.
> >> configure: error: Could not compile conftest.f
> >>
> >> The setting in my ~/.bashrc is:
> >>
> >> 18 export BIN=3DLinux2_x86pg
> >> 19
> >> 20 #configuration from
> >> http://www.pgroup.com/resources/netcdf/netcdf362_pgi80.htm
> >> 21 export CC=3Dpgcc
> >> 22 export CFLAGS=3D"-O2 -Msignextend -V"
> >> 23 export F77=3Dpgf90
> >> 24 export FC=3Dpgf90
> >> 25 export F90=3Dpgf90
> >> 26 export FFLAGS=3D"-02 -w -V"
> >> 27 # export CXX=3Dpgcpp
> >> 28 export CXX=3DpgCC
> >> 29 export CPPFLAGS=3D"-DNDEBUG -DpgiFortran -D_LARGEFILE_SOURCE"
> >>
>> Can anybody please tell me what's wrong with it? Thank you!
> >>
> >> --
> >> Cordially,
> >> Hongyan
> >> =E9=B8=BF=E9=9B=81
> >> _______________________________________________
> >> netcdfgroup mailing list
> >> address@hidden
> >> For list information or to unsubscribe, visit:
> >> http://www.unidata.ucar.edu/mailing_lists/
> >>
> >
> >
>
>
> --=20
> Cordially,
> Hongyan
> =E9=B8=BF=E9=9B=81
>
> --000feaf371e3103b9c048795eafb
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>
> Hi Ted,<br><br>Thanks for your message. I went back to config.log and got t=
> his:<br><br><span style=3D"color: rgb(0, 153, 0);">=C2=A0276 PGF90-S-0034-S=
> yntax error at or near end of line (conftest.F: 3)</span><br style=3D"color=
> : rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0277=C2=A0=C2=A0 0 inform,=C2=
> =A0=C2=A0 0 warnings,=C2=A0=C2=A0 1 severes, 0 fatal for main</span><br sty=
> le=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0=
> 278 configure:4765: $? =3D 2</span><br style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0279 configure: failed program =
> was:</span><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0=
> , 153, 0);">=C2=A0280 |=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 program main</s=
> pan><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, =
> 0);">=C2=A0281 | #ifndef __GNUC__</span><br style=3D"color: rgb(0, 153, 0);=
> ">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0282 |=C2=A0=C2=A0=C2=A0=C2=A0=
> =C2=A0=C2=A0=C2=A0 choke me</span><br style=3D"color: rgb(0, 153, 0);"><spa=
> n style=3D"color: rgb(0, 153, 0);">=C2=A0283 | #endif</span><br style=3D"co=
> lor: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0284 |</s=
> pan><br style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0285 |=C2=A0=C2=A0=C2=A0=C2=A0=
> =C2=A0=C2=A0 end</span><br style=3D"color: rgb(0, 153, 0);"><br style=3D"co=
> lor: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0357 conf=
> igure:5582: pgCC -c=C2=A0 -DNDEBUG -DpgiFortran -D_LARGEFILE_SOURCE conftes=
> t.cpp >&5</span><br style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0358 "conftest.cpp", =
> line 17: error: identifier "choke" is undefined</span><br style=
> =3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A035=
> 9=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 choke me</span><br =
> style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0360=C2=A0=C2=A0=C2=A0=C2=A0=C2=
> =A0=C2=A0=C2=A0=C2=A0=C2=A0 ^</span><br style=3D"color: rgb(0, 153, 0);"><s=
> pan style=3D"color: rgb(0, 153, 0);">=C2=A0361 </span><br style=3D"color: r=
> gb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0362 "conf=
> test.cpp", line 17: warning: variable "me" was declared but =
> never</span><br style=3D"color: rgb(0, 153, 0);">
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0363=C2=A0=C2=A0=C2=A0=C2=A0=C2=
> =A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 referenced</span><br style=3D"color: rgb(=
> 0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0364=C2=A0=C2=A0=
> =C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 choke me</span><br style=3D"colo=
> r: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0365=C2=A0=
> =C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=
> =A0=C2=A0 ^</span><br style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0366 </span><br style=3D"color:=
> rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0367 1 error =
> detected in the compilation of "conftest.cpp".</span><br style=3D=
> "color: rgb(0, 153, 0);">
>
> <br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);"=
> >=C2=A0713 configure:9380: pgCC -E -DNDEBUG -DpgiFortran -D_LARGEFILE_SOURC=
> E conftest.cpp</span><br style=3D"color: rgb(0, 153, 0);"><span style=3D"co=
> lor: rgb(0, 153, 0);">=C2=A0714 "conftest.cpp", line 23: error: c=
> ould not open source file "ac_nonexistent.h"</span><br style=3D"c=
> olor: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0715=C2=A0=C2=A0 #include <a=
> c_nonexistent.h></span><br style=3D"color: rgb(0, 153, 0);"><span style=
> =3D"color: rgb(0, 153, 0);">=C2=A0716=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=
> =C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=
> =A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 ^</span><br=
> style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0717 </span><br style=3D"color:=
> rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);">=C2=A0718 1 error =
> detected in the compilation of "conftest.cpp".</span><br style=3D=
> "color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0719 configure:9386: $? =3D 2</=
> span><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153,=
> 0);">=C2=A0720 configure: failed program was:</span><br style=3D"color: rg=
> b(0, 153, 0);">
> <br style=3D"color: rgb(0, 153, 0);">
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0748 "conftest.cpp", =
> line 23: error: could not open source file "ac_nonexistent.h"</sp=
> an><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0=
> );">=C2=A0749=C2=A0=C2=A0 #include <ac_nonexistent.h></span><br style=
> =3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0750=C2=A0=C2=A0=C2=A0=C2=A0=C2=
> =A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=
> =C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 ^<=
> /span><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153=
> , 0);">=C2=A0751 </span><br style=3D"color: rgb(0, 153, 0);"><span style=3D=
> "color: rgb(0, 153, 0);">=C2=A0752 1 error detected in the compilation of &=
> quot;conftest.cpp".</span><br style=3D"color: rgb(0, 153, 0);">
>
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0753 configure:9491: $? =3D 2</=
> span><br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153,=
> 0);">=C2=A0754 configure: failed program was:</span><br style=3D"color: rg=
> b(0, 153, 0);">
> <span style=3D"color: rgb(0, 153, 0);">=C2=A0755 | /* confdefs.h.=C2=A0 */<=
> /span><br style=3D"color: rgb(0, 153, 0);">
> <br style=3D"color: rgb(0, 153, 0);"><span style=3D"color: rgb(0, 153, 0);"=
> >1050 configure:22807: error: Could not compile conftest.f</span><br style=
> =3D"color: rgb(0, 153, 0);"><br style=3D"color: rgb(0, 153, 0);"><span styl=
> e=3D"color: rgb(0, 153, 0);">1350 configure: exit 1</span><br>
>
> <br>But I just download the whole thing...<br><br>Hongyan<br><div class=3D"=
> gmail_quote">On Thu, May 27, 2010 at 12:13 PM, Ted Mansell <span dir=3D"ltr=
> "><<a href=3D"mailto:address@hidden";>address@hidden</a>><=
> /span> wrote:<br>
>
> <blockquote class=3D"gmail_quote" style=3D"margin: 0pt 0pt 0pt 0.8ex; borde=
> r-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">Have you checked =
> in the config.log output to see what the full error is? =C2=A0There is some=
> issue with the fortran compiler, which could be a number of things.<br>
>
>
> <br>
> -- Ted<div><div></div><div class=3D"h5"><br>
> <br>
> On May 27, 2010, at 11:09 AM, H.Dang wrote:<br>
> <br>
> </div></div><blockquote class=3D"gmail_quote" style=3D"margin: 0pt 0pt 0pt =
> 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;"><div>=
> <div></div><div class=3D"h5">
> Hello,<br>
> <br>
> I met a problem when ./configure --prefix=3D...<br>
> <br>
> checking for /usr/bin/nm... /usr/bin/nm -B<br>
> checking nm flags...<br>
> checking for C-equivalent to Fortran routine "SUB"...<br>
> pgf90 9.0-4 64-bit target on x86-64 Linux -tp nehalem-64<br>
> Copyright 1989-2000, The Portland Group, Inc. =C2=A0All Rights Reserved.<br=
> >
> Copyright 2000-2009, STMicroelectronics, Inc. =C2=A0All Rights Reserved.<br=
> >
> configure: error: Could not compile conftest.f<br>
> <br>
> The setting in my ~/.bashrc is:<br>
> <br>
> =C2=A018 =C2=A0export BIN=3DLinux2_x86pg<br>
> =C2=A019<br>
> =C2=A020 #configuration from <a href=3D"http://www.pgroup.com/resources/net=
> cdf/netcdf362_pgi80.htm" target=3D"_blank">http://www.pgroup.com/resources/=
> netcdf/netcdf362_pgi80.htm</a><br>
> =C2=A021 =C2=A0export CC=3Dpgcc<br>
> =C2=A022 =C2=A0export CFLAGS=3D"-O2 -Msignextend -V"<br>
> =C2=A023 =C2=A0export F77=3Dpgf90<br>
> =C2=A024 =C2=A0export FC=3Dpgf90<br>
> =C2=A025 =C2=A0export F90=3Dpgf90<br>
> =C2=A026 =C2=A0export FFLAGS=3D"-02 -w -V"<br>
> =C2=A027 # export CXX=3Dpgcpp<br>
> =C2=A028 =C2=A0export CXX=3DpgCC<br>
> =C2=A029 =C2=A0export CPPFLAGS=3D"-DNDEBUG -DpgiFortran -D_LARGEFILE_S=
> OURCE"<br>
> <br>
> Can anybody please tell me what's wrong with it? Thank you!<br>
> <br>
> -- <br>
> Cordially,<br>
> Hongyan<br>
> =E9=B8=BF=E9=9B=81<br></div></div>
> _______________________________________________<br>
> netcdfgroup mailing list<br>
> <a href=3D"mailto:address@hidden"; target=3D"_blank">netcdfgro=
> address@hidden</a><br>
> For list information or to unsubscribe, =C2=A0visit: <a href=3D"http://www.=
> unidata.ucar.edu/mailing_lists/" target=3D"_blank">http://www.unidata.ucar.=
> edu/mailing_lists/</a><br>
> </blockquote>
> <br>
> </blockquote></div><br><br clear=3D"all"><br>-- <br>Cordially,<br>Hongyan <=
> br>=E9=B8=BF=E9=9B=81<br>
>
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