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[netCDF #KVK-604612]: Fail in check in latest snapshot

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  • Subject: [netCDF #KVK-604612]: Fail in check in latest snapshot
  • Date: Fri, 20 Nov 2009 06:15:36 -0700
> Running OS X 10.6.2, Fink compilers, gfortran, hdf 1.8.4.  Make runs okay.  
> Make test fails with
> 
> 
> 
> ** Checking HDF5 variable functions.
> *** Checking HDF5 boolean variables...ok.
> *** Checking HDF5 variable with unlimited dimension...ok.
> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 0:
> #000: H5Z.c line 1273 in H5Zget_filter_info(): Filter not defined
> major: Invalid arguments to routine
> minor: Bad value
> #001: H5Z.c line 923 in H5Z_find(): required filter is not registered
> major: Data filters
> minor: Object not found
> *** Checking HDF5 deflate filter setting and getting...Sorry! Unexpected 
> result, tst_h_vars.c, line: 228
> 1 failures
> HDF5-DIAG: Error detected in HDF5 (1.8.4) thread 0:
> #000: H5Z.c line 1273 in H5Zget_filter_info(): Filter not defined
> major: Invalid arguments to routine
> minor: Bad value
> #001: H5Z.c line 923 in H5Z_find(): required filter is not registered
> major: Data filters
> minor: Object not found
> *** Checking HDF5 deflate, fletcher32, shuffle filter setting and 
> getting...Sorry! Unexpected result, tst_h_vars.c, line: 300
> 1 failures
> *** Checking HDF5 endianness control...ok.
> 2 errors detected! Sorry!
> FAIL: tst_h_vars
> 
> **********************
> "The contents of this message do not reflect any position of the U.S. 
> Government or NOAA."
> **********************
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> 1352 Lighthouse Avenue
> Pacific Grove, CA 93950-2097
> 
> e-mail: address@hidden (Note new e-mail address)
> voice: (831)-648-9029
> fax: (831)-648-8440
> www: http://www.pfeg.noaa.gov/
> 

Howdy Roy!

I hope things are going well for you in California these days!

Your make check failure seems to imply that you built HDF5-1.8.4 without the 
--with-zlib option. 

You must use --with-zlib for netCDF-4 to work.

Here's a little hint for the future, test programs that start tst_h_* are tests 
of the HDF5 installation, and don't involve any netCDF code. So when a test 
with that sort of name fails, it means that your HDF5 layer is the place to 
look for the problem.

Thanks!

Ed

Ticket Details
===================
Ticket ID: KVK-604612
Department: Support netCDF
Priority: Normal
Status: Closed