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[netCDF #CDR-382376]: NetCDF-4 make check error

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  • Subject: [netCDF #CDR-382376]: NetCDF-4 make check error
  • Date: Fri, 07 Nov 2008 05:35:39 -0700
> Hello,
> I am having problems installing the NetCDF4 library on GFDL's
> supercomputer (64-bit architecture, this is the output of uname -a:
> "Linux ic0 2.6.16.54-0.2.8.PTF.387784.0-default #1 SMP Mon Jun 23
> 13:41:12 UTC 2008 ia64 ia64 ia64 GNU/Linux").
>
> I got the source here:
> http://www.unidata.ucar.edu/downloads/netcdf/netcdf-4_0/index.jsp
>
> used these environment variables:
> setenv LIBS -lirc
> setenv FCFLAGS -L/opt/ifort/8.0.044/lib/
> setenv LDFLAGS -L/opt/icc/9.1.051/lib/
> (because I got strange linking errors otherwise)
>
> and ran configure with these options:
> ./configure --enable-c-only --prefix=/home/pcmdi/local/CMOR2/
> --with-hdf5=/home/pcmdi/local/CMOR2/ --with-zlib=/home/pcmdi/local/CMOR2
> --enable-netcdf-4  --disable-shared
>
> after that running "make" and then "make check" produced the following
> error:
>
>
> *** Testing netcdf-4 CDM compliance: sea soundings.
> *** creating simple sea sounding file...ok.
> /bin/sh: line 1: 126466 Aborted                 ${dir}$tst
> FAIL: cdm_sea_soundings
> =========================================
> 1 of 1 tests failed
> Please report to address@hidden
> =========================================
>
> Thanks,
> -Yana Malysheva
>
>

Howdy Yana!

Can you send me the complete output of make check and the config.log file?

Also, you should be working with the netCDF daily snapshot, it has several
improvements that may help make it easier to build on supercomputers. Get it
here:ftp://ftp.unidata.ucar.edu/pub/netcdf/snapshot/netcdf-4-daily.tar.gz

Thanks,

Ed

Ticket Details
===================
Ticket ID: CDR-382376
Department: Support netCDF
Priority: Normal
Status: Open