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[netCDF #KWP-826242]: undefined symbol: ?0_memcopyA

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  • Subject: [netCDF #KWP-826242]: undefined symbol: ?0_memcopyA
  • Date: Tue, 14 Aug 2007 07:53:28 -0600
> Hi Ed,
> Thanks for helping.
> Here is the info you requested:
>
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2 # uname -a
> Linux khepra 2.6.5-7.276-sn2 #1 SMP Mon Jul 24 10:45:31 UTC 2006 ia64
> ia64 ia64 GNU/Linux
>
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2 # make --version
> GNU Make 3.80
> Copyright (C) 2002  Free Software Foundation, Inc.
> This is free software; see the source for copying conditions.
> There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A
> PARTICULAR PURPOSE.
>
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2 # ls -ld `which make`
> -rwxr-xr-x  1 root root 316054 Jun 30  2004 /usr/bin/make
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2 # ls -ld `which gmake`
> lrwxrwxrwx  1 root root 4 Sep 14  2006 /usr/bin/gmake -> make
>
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2/nf_test # ./ftest
> *** Testing netCDF-2 Fortran 77 API.
> *** testing nccre ...
> *** testing ncddef ...
> *** testing ncvdef ...
> *** testing ncapt, ncaptc ...
> *** testing ncclos ...
> *** testing ncvpt1 ...
> *** testing ncvgt1 ...
> *** testing ncvpt ...
> *** testing ncopn, ncinq, ncdinq, ncvinq, ncanam, ncainq ...
> *** testing ncvgt, ncvgtc ...
> *** testing ncagt, ncagtc ...
> *** testing ncredf, ncdren, ncvren, ncaren, ncendf ...
> ./ftest: symbol lookup error: ./ftest: undefined symbol: ?0_memcopyA
> khepra:/usr/local/2install/netcdf/src/netcdf-3.6.2/nf_test # echo $?
> 127
>
> I hope we can fix that.
> Thanks.
> Fernando.
>
>
> 2007/7/25, Unidata netCDF Support <address@hidden>:
> > > Hi support,
> > >
> > > I am trying to compile/install netcdf-3.6.2. in an Intel Xeon running
> > > Linux  2.6.5-7.276-sn2 #1 SMP Mon Jul 24 10:45:31 UTC 2006 ia64 ia64
> > > ia64 GNU/Linux.
> > >
> > > I followed INSTALL instructions...
> > >
> > > netcdf/src/netcdf-3.6.2 # ./configure  -enable-large-file-tests | tee
conf.log
> > > netcdf/src/netcdf-3.6.2 # make | tee make.log
> > > netcdf/src/netcdf-3.6.2 # make check | tee make_check.log
> > >
> > > At some point "make check" issues
> > > ....
> > > *** testing ncredf, ncdren, ncvren, ncaren, ncendf ...
> > > ./ftest: symbol lookup error: ./ftest: undefined symbol: ?0_memcopyA
> > > FAIL: ftest
> > > *** Testing netCDF-3 Fortran 90 API.
> > > *** SUCCESS!
> > > PASS: tst_f90
> > > =========================================
> > > 2 of 5 tests failed
> > > Please report to address@hidden
> > > =========================================
> > > make[2]: *** [check-TESTS] Error 1
> > > make[2]: Leaving directory
`/usr/local/2install/netcdf/src/netcdf-3.6.2/nf_test'
> > > ....
> > >
> > > I've searched Unidatas "Finding Help On-line" page without success.
> > >
> > > Please see attached files.
> > >
> > > Thanks in advance
> > > Fernando Barros
> > > INMET - Brazil
> > >
> > >
> >

I'm sorry, but I can't see what is going wrong for you.

We have had some other problems with the ia64 platform and intel.

Could you try setting the flags suggested by this user:
http://www.unidata.ucar.edu/software/netcdf/docs/other-builds.html#linux_ifort

Please let me know if this doesn't work for you.

Thanks,

Ed

Ticket Details
===================
Ticket ID: KWP-826242
Department: Support netCDF
Priority: Critical
Status: Closed