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[IDV #UQE-686970]: Cannot load netcdf4 file, It does work in IDV 2.6u2 but not in IDV 2.7b2

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  • Subject: [IDV #UQE-686970]: Cannot load netcdf4 file, It does work in IDV 2.6u2 but not in IDV 2.7b2
  • Date: Fri, 05 Jun 2009 10:57:27 -0600
Hi Maarten-

> Full Name: Maarten Plieger
> Email Address: address@hidden
> Organization: KNMI (Royal Netherlands Meteorological Institute)
> Package Version: 2.7b2 build date:2009-05-27 19:52 UTC
> Operating System: Windows XP
> Hardware: Java: home: C:\Program Files\IDV_2.7b2\jre version: 1.6.0_11 
> j3d:1.5.2 fcs (build4)
> Description of problem: I know that this file does not conform to the CF 
> standards, but it could be perfectly read in IDV 2.6u2.
> In the 2.7b2 version I get the following error:

Thanks for catching this.  The netCDF-java and IDV repositories were out
of sync on this class.  I've corrected that and created a new nightly
build.  I tested with your sample file and it worked.

This summer we are going to move to a common repository for these classes
which  will avoid this problem in the future.

Don

> There was an error loading the data:
> Error creating data source:file.grid with: 
> M:\INTER_TEST_R___Kriging_L3__19500101T000000_99991230T235959_0001.nc
> Grid data source failed making data set: 
> M:\INTER_TEST_R___Kriging_L3__19500101T000000_99991230T235959_0001.nc
> java.lang.NoSuchMethodError: ucar.unidata.util.SpecialMathFunction.log2(D)D
> 
> Because it worked in the previous version I thought that this message might 
> be useful for you.
> Regards, Maarten
> 
> ******************
> Stack trace:
> java.lang.RuntimeException: java.lang.NoSuchMethodError: 
> ucar.unidata.util.SpecialMathFunction.log2(D)D
> at ucar.nc2.NetcdfFile.<init>(NetcdfFile.java:1307)
> at ucar.nc2.NetcdfFile.open(NetcdfFile.java:726)
> at ucar.nc2.NetcdfFile.open(NetcdfFile.java:381)
> at ucar.nc2.dataset.NetcdfDataset.openOrAcquireFile(NetcdfDataset.java:676)
> at ucar.nc2.dataset.NetcdfDataset.openDataset(NetcdfDataset.java:431)
> at ucar.nc2.dataset.NetcdfDataset.acquireDataset(NetcdfDataset.java:511)
> at ucar.nc2.dt.grid.GridDataset.open(GridDataset.java:88)
> at 
> ucar.unidata.data.grid.GeoGridDataSource.doMakeDataSet(GeoGridDataSource.java:1052)
> at 
> ucar.unidata.data.grid.GeoGridDataSource.getDataset(GeoGridDataSource.java:1074)
> at 
> ucar.unidata.data.grid.GeoGridDataSource.initAfterCreation(GeoGridDataSource.java:443)
> at ucar.unidata.data.DataManager.createDataSource(DataManager.java:1490)
> at 
> ucar.unidata.idv.IntegratedDataViewer.createDataSource(IntegratedDataViewer.java:1954)
> at 
> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1871)
> at 
> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1805)
> at 
> ucar.unidata.idv.IntegratedDataViewer.makeDataSource(IntegratedDataViewer.java:1778)
> at ucar.unidata.idv.chooser.IdvChooser.makeDataSource(IdvChooser.java:907)
> at ucar.unidata.idv.chooser.FileChooser.selectFilesInner(FileChooser.java:661)
> at ucar.unidata.idv.chooser.FileChooser.selectFiles(FileChooser.java:530)
> at ucar.unidata.idv.chooser.FileChooser.doLoadInThread(FileChooser.java:552)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at 
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
> at 
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> at java.lang.reflect.Method.invoke(Method.java:597)
> at ucar.unidata.util.Misc$2.run(Misc.java:1033)
> at ucar.unidata.util.Misc$3.run(Misc.java:1061)
> Caused by: java.lang.NoSuchMethodError: 
> ucar.unidata.util.SpecialMathFunction.log2(D)D
> at 
> ucar.nc2.iosp.hdf5.H5header$FractalHeap$IndirectBlock.<init>(H5header.java:4941)
> at ucar.nc2.iosp.hdf5.H5header$FractalHeap.<init>(H5header.java:4784)
> at ucar.nc2.iosp.hdf5.H5header.readGroupNew(H5header.java:3423)
> at ucar.nc2.iosp.hdf5.H5header.access$1100(H5header.java:64)
> at ucar.nc2.iosp.hdf5.H5header$H5Group.<init>(H5header.java:1764)
> at ucar.nc2.iosp.hdf5.H5header$H5Group.<init>(H5header.java:1729)
> at ucar.nc2.iosp.hdf5.H5header.readSuperBlock2(H5header.java:319)
> at ucar.nc2.iosp.hdf5.H5header.read(H5header.java:173)
> at ucar.nc2.iosp.hdf5.H5iosp.open(H5iosp.java:100)
> at ucar.nc2.NetcdfFile.<init>(NetcdfFile.java:1289)
> ... 24 more
> 
> 
> 


Ticket Details
===================
Ticket ID: UQE-686970
Department: Support IDV
Priority: Normal
Status: Open