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[GEMPAK #NKY-799525]: installation errors

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  • Subject: [GEMPAK #NKY-799525]: installation errors
  • Date: Wed, 12 Mar 2014 11:02:30 -0600
Hi Kevin,

I don't have a fc20 machine so can't test the build with the same version of 
gcc as you, so I'm going off of what I've read this morning.  The error below 
have an important message "The bug is not reproducible, so it is likely a 
hardware or OS problem"

Before looking at hardware issues, one thread I read found a similar error 
because /tmp was not write-accessible.  

http://stackoverflow.com/questions/15564752/cant-open-tmp-ccrbtake-s-for-writing-while-compiling-with-gcc

Can you confirm this? 



  CC       H5Defl.lo
In file included from /usr/include/signal.h:32:0,
                 from H5private.h:57,
                 from H5Defl.c:31:
/usr/include/bits/sigset.h: In function '__sigismember':
/usr/include/bits/sigset.h:116:1: internal compiler error: Segmentation fault
 __SIGSETFN (__sigismember, (__set->__val[__word] & __mask) ? 1 : 0, const)
make[6]: *** [H5Defl.lo] Error 1
make[6]: Leaving directory `/usr1/GEMPAK7/extlibs/HDF5/v1.8.10/src'
make[5]: *** [all] Error 2
make[5]: Leaving directory `/usr1/GEMPAK7/extlibs/HDF5/v1.8.10/src'
make[4]: *** [all-recursive] Error 1
make[4]: Leaving directory `/usr1/GEMPAK7/extlibs/HDF5/v1.8.10'
make[3]: [_lhdf5] Error 2 (ignored)


happens again with melBUFR:

In file included from /usr/include/memory.h:29:0,
                 from /usr1/nawips/os/linux64/include/mel_bufr.h:17,
                 from EV_Get.c:9:
/usr/include/string.h:93:7: internal compiler error: Segmentation fault
       __THROW __attribute_pure__ __nonnull ((1));
       ^
Please submit a full bug report,
with preprocessed source if appropriate.
See <http://bugzilla.redhat.com/bugzilla> for instructions.
The bug is not reproducible, so it is likely a hardware or OS problem.
make[4]: *** [/usr1/nawips/os/linux64/lib/libmel_bufr.a(EV_Get.o)] Error 1




and ncepBUFR

make[3]: *** [/usr1/nawips/os/linux64/lib/libncepBUFR.a(writcp.o)] Segmentation 
fault (core dumped)
make[3]: *** Archive member 
`/usr1/nawips/os/linux64/lib/libncepBUFR.a(writcp.o)' may be bogus; not deleted
make[3]: Leaving directory `/usr1/GEMPAK7/extlibs/ncepBUFR/v10.2.3'
make[2]: *** [all] Error 2
make[2]: Leaving directory `/usr1/GEMPAK7/extlibs/ncepBUFR'


> Full Name: Kevin Polston
> Email Address: address@hidden
> Organization: Raytheon
> Package Version: 7
> Operating System: Fedora 20
> Hardware:
> Description of problem:
> 
> I installed a new hard drive (bigger) and I installed Fedora 20 on it.
> I followed the pre installation steps and installed the libraries
> and packages from the Installation page.  After running make I got
> some errors.  I have attached my make.out file to see if you could help
> figure out where the issue is.
> 
> I am wondering if I am missing something that needs to be installed or
> perhaps its something else. In any event, it didn't make properly and
> I need some help. Thanks.
> 
> Kevin
> 
> 

Ticket Details
===================
Ticket ID: NKY-799525
Department: Support GEMPAK
Priority: Normal
Status: Open