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[netCDF #XUG-723381]: Missing netcdf.mod
- Subject: [netCDF #XUG-723381]: Missing netcdf.mod
- Date: Mon, 21 May 2012 12:32:30 -0600
> Thanks so much for your help regarding this matter. I have gotten the
> netcdf-fortran API installed, but my application that is trying to use it
> is complaining about undefined references to a series of calls.
You only need to add another loader option, "-lnetcdff", to make the compiler
look in the Fortran library as well as the C library. So where you now have
"-lnetcdf", substitute "-lnetcdff -lnetcdf".
> ... I remember
> running into something similar to this a year ago with a previous netcdf
> install, and it had to do something with the number of
> underscores proceeding a function call? Here is a portion of the errors I
> got when attempting to compile in blue below; see attachment for the full
> makelog. I am rather novice when dealing with installation issues. Is
> there a linux command I could use to search for functions within my netcdf
> library; for instance "netcdf_MP_nf90_create"? To determine if this is a
> underscore issue?
Although it's not the solution to this issue, you can use the "nm" command to
list the names of symbols in an object file, such as a library. To see what
external symbols include the string "nf90_create" in /opt/lib/libnetcdff.a,
for example, you could use
$ nm -g /opt/lib/libnetcdff.a | grep nf90_create
00000000000401c0 T __netcdf_MOD_nf90_create
00000000000404a0 T __netcdf_MOD_nf90_create_mp
--Russ
> Some additional information This is netcddf 4.2. I
> have successfully installed both netcdf c and fortran APIs. I am using g95
> and gcc as my compliers. The code I am attempting to install is a 1D
> version of the Noah land surface model (it has been well tested and should
> work).
>
> Let me know if you need any other information.
>
> Thanks,
>
> g95 -o driver.exe module_sf_noahmplsm.o module_model_constants.o
> module_sf_myjsfc.o module_sf_sfclay.o module_sf_noahlsm.o module_ascii_io.o
> module_netcdf_io.o module_io.o kwm_date_utilities.o module_sf_noahutl.o
> driver.o -L/home/ronnieleeper/prgs/netcdf/lib -lnetcdf
> module_netcdf_io.o: In function
> `module_netcdf_io_MP_initialize_netcdf_output':
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:58:
> undefined reference to `netcdf_MP_nf90_create'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:61:
> undefined reference to `netcdf_MP_nf90_def_dim'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:64:
> undefined reference to `netcdf_MP_nf90_def_dim'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:68:
> undefined reference to `netcdf_MP_nf90_def_dim'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:73:
> undefined reference to `netcdf_MP_nf90_def_dim'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:78:
> undefined reference to `netcdf_MP_nf90_def_dim'
> module_netcdf_io.o:/home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:83:
> more undefined references to `netcdf_MP_nf90_def_dim' follow
> module_netcdf_io.o: In function
> `module_netcdf_io_MP_initialize_netcdf_output':
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:90:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbytereal'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:93:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbyteint'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:96:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbyteint'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:99:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbyteint'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:102:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbyteint'
> /home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:105:
> undefined reference to `netcdf_MP_nf90_put_att_one_fourbyteint'
> module_netcdf_io.o:/home/ronnieleeper/noah-mp1D/Simple-Driver-NoahMP-v1.0/module_netcdf_io.f:108:
> more undefined references to `netcdf_MP_nf90_put_att_one_fourbyteint' follow
> module_netcdf_io.o: In function
> `module_netcdf_io_MP_initialize_netcdf_output':
Russ Rew UCAR Unidata Program
address@hidden http://www.unidata.ucar.edu
Ticket Details
===================
Ticket ID: XUG-723381
Department: Support netCDF
Priority: Normal
Status: Closed