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[netCDF #GNP-293876]: module file problem
- Subject: [netCDF #GNP-293876]: module file problem
- Date: Fri, 23 Mar 2012 11:03:27 -0600
> I get the same error with version 4.2. I can compile and install with the
> following option.
>
> env CC=pgcc CXX=pgcpp FC=pgfortran F90=pgfortran LD=pgfortran
> CPPFLAGS="-DpgiFortrani " ./configure
> --prefix=/home/fake/netcdf/netcdf_install --disable-netcdf-4
>
> But when I try to compile the code I want to use netcdf with I get the error
> messages in the attached file. Any idea why?
...
> $ make
> /opt/platform_mpi/bin/mpif90 mod_prec.o mod_types.o mod_main.o
> mod_utils.o mod_par.o mod_inp.o mod_wd.o mod_probe.o mod_clock.o
> mod_spherical.o mod_obcs.o mod_wqm.o mod_gotm.o mod_equitide.o mod_atmotide.o
> mod_heatflux.o mod_northpole.o mod_balance_2d.o mod_tsobc.o mod_meanflow.o
> mod_obcs2.o mod_obcs3.o mod_dye.o mod_newinp.o mod_tridiag.o mod_scal.o
> mod_sed.o particle.o linklist.o mod_enkf.o mod_etkf.o mod_rrk.o
> mod_rrkassim.o mod_optimal_interpolation.o mod_assim.o mod_ncdio.o
> mod_ncdave.o mod_lag.o mod_visit.o mod_petsc.o mod_semi_implicit.o
> utilities.o adjust2d3d.o advave_edge_gcn.o adv_q.o advection_edge_gcn.o
> adv_s.o adv_t.o adv_uv_edge_gcn.o alloc_vars.o archive.o arcrst.o atg.o
> fct_s.o fct_t.o baropg.o bcmap.o bcond_bfw.o bcond_gcn.o bcond_ts.o
> bcs_force.o brough.o brough_ud.o bracket.o cell_area.o conv_over.o data_run.o
> dens.o dens2.o depth_grad.o domdec.o extel_edge.o extuv_edge.o genmap.o
> getdim.o initial_qql.o hot_start_data.o initial_ts.o initial_uvel.o iof
iles.o out_avge.o out_binary.o out_sms_one.o pdomdec.o phy_baropg.o report.o
sectinf.o set_bndry.o set_sigma.o shape_coef_gcn.o sinter.o startup.o svan.o
theta.o us_fvcom.o tge.o vdif_q.o vdif_ts.o vdif_uv.o vertvl_edge.o
water_depth.o wreal.o ghostuv.o dens3.o init_sed.o advave_edge_gcy.o
advection_edge_gcy.o closefiles.o adv_uv_edge_gcy.o bcond_gcy.o
shape_coef_gcy.o depth_check.o vdif_ts_gom.o adjust_ts.o shutdown_check.o
extelpf_edge.o fct_q2.o fct_q2l.o viscofh.o print_vals.o visitsim.o rho_mean.o
adcor.o viz.o mod_bio_3D.o mod_onedtide.o -L../METIS_source -lmetis
-L/usr/lib64 -lnetcdf -o fvcom
> mod_ncdio.o: In function `mod_ncdio_handle_ncerr_':
> /c1/fake/FVCOM/FVCOM2.7.1/FVCOM_source/./mod_ncdio.f90:156: undefined
> reference to `netcdf_nf90_strerror_'
> mod_ncdio.o: In function `mod_ncdio_write_netcdf_setup_':
> /c1/fake/FVCOM/FVCOM2.7.1/FVCOM_source/./mod_ncdio.f90:342: undefined
> reference to `netcdf_nf90_create_'
...
It looks like you're not telling the compiler where to find the netCDF Fortran
library, which is separate
from the netCDF C library. It may be enough to just replace "-lnetcdf" with
"-lnetcdff -lnetcdf".
--Russ
Russ Rew UCAR Unidata Program
address@hidden http://www.unidata.ucar.edu
Ticket Details
===================
Ticket ID: GNP-293876
Department: Support netCDF
Priority: Normal
Status: Closed