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20030904: netCDF linking problem using pgf90

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  • Subject: 20030904: netCDF linking problem using pgf90
  • Date: Thu, 04 Sep 2003 09:50:09 -0600
Roger,

>Date: Thu, 4 Sep 2003 17:58:49 +0800 (HKT)
>From: "HIU FUNG ROGER Kwok" <address@hidden>
>Organization: UCAR/Unidata
>To: <address@hidden>
>Subject: [Fwd: Current attachments]

The above message contained the following:

> Please ignore the last attachments sent to you. I am sorry to give you
> the wrong ones. The right ones are attached, and consist of three files:
> 
> AtoH  -   the items to diagnose netcdf installation problem;
> 
> Makefile  -  the make file for the model I mentioned in last mail;
> 
> make.log  -  the logbook of Makefile's execution.

Here is the successful test of the Fortran-90 interface of the netCDF
package:

    /math/import/application/pgi/4.0/linux86/bin/pgf90 -o nf_test -O -w \
    test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o \
    util.o fortlib.o ../libsrc/libnetcdf.a -lm
    ./nf_test -c
    ./nf_test
    *** Testing nf_strerror ... 
    *** Testing nf_open ... 
    *** Testing nf_close ... 

Here is the failed attempt to build a program that used the Fortran-90
interface of the netCDF package:

    /math/import/application/pgi/4.0/linux86/bin/pgf90 -o mcip.exe \
    -O2 -tp p7 -pc 32 -Mvect=prefetch -Mnoframe -Mfree -byteswapio \
    mcip.o alloc_met.o alloc_ctm.o alloc_x.o bcldprc_ak.o bilin2d.o \
    bilin3d.o close_files.o comheader.o collapx.o crs2dot.o cvmgp.o \
    cvmgz.o dealloc_met.o dealloc_x.o dealloc_ctm.o dynflds.o \
    getgist.o getluse.o getmet.o getpblht.o getsdt.o getversion.o \
    graceful_stop.o gridout.o init_met.o init_x.o julian.o layht.o \
    locate.o lutrans1.o lutrans2.o lutrans3.o lutrans4.o lutrans5.o \
    lutrans6.o m3dry.o mdate2hdate.o met3dsup.o metcro.o metdot.o \
    metgrid2ctm.o metvars2ctm.o null_x.o pblpkg.o pblpwr.o pblsup.o \
    radmdry.o ratint.o rdmm5.o rdmm5v2.o rdmm5v3.o readnml.o refstate.o \
    resistcalc.o setgriddefs.o setupmm5.o setupv2.o setupv3.o \
    sfcflux.o sfclayer.o slflux.o solar.o statflds.o transm.o \
    vertarys.o verthyd.o vertnhy.o vstamp.o wrgdesc.o const_mod.o \
    const_mete_mod.o const_pbl_mod.o coord_mod.o date_pack_mod.o \
    date_time_mod.o parms3_mod.o fdesc3_mod.o file_mod.o iodecl3_mod.o \
    lradmdat_mod.o groutcom_mod.o mcipparm_mod.o mcoutcom_mod.o \
    mdoutcom_mod.o metinfo_mod.o metvars_mod.o vgrd_mod.o xvars_mod.o \
    -L/math/staff/ma/maroger/cmaq/lib/ioapi_22/Linux2_x86pg -lioapi \
    -L/math/staff/ma/maroger/cmaq/lib/netCDF/Linux -lnetcdf
    /math/staff/ma/maroger/cmaq/lib/ioapi_22/Linux2_x86pg/libioapi.a(init3.o): 
In function `init3_':
    init3.o(.text+0x538): undefined reference to `nf_inq_libvers__'
    
/math/staff/ma/maroger/cmaq/lib/ioapi_22/Linux2_x86pg/libioapi.a(opnfil3.o): In 
function `opnfil3_':
    opnfil3.o(.text+0x127): undefined reference to `nf_open__'
    ...

I want to verify the contents of your installed, netCDF library.  Please
send me the output of the following command:

    nm -g /math/staff/ma/maroger/cmaq/lib/netCDF/Linux/libnetcdf.a

Regards,
Steve Emmerson