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[netCDFPerl #AZE-820808]: netcdf-perl install fails test

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  • Subject: [netCDFPerl #AZE-820808]: netcdf-perl install fails test
  • Date: Wed, 07 Jan 2009 15:34:11 -0700
Erik,

> Sorry to reopen this issue, but my user is having the same issue as is
> happening with the failed test. On a make test we are getting this output:
> 
> make test
> make[1]: Entering directory
> `/uufs/chpc.utah.edu/sys/pkg/netcdf-perl/1.2.3-rebuild/src'
> 
> making `test' in directory
> /uufs/chpc.utah.edu/sys/pkg/netcdf-perl/1.2.3-rebuild/src/perl
> 
> make[2]: Entering directory
> `/uufs/chpc.utah.edu/sys/pkg/netcdf-perl/1.2.3-rebuild/src/perl'
> cp NetCDF.pm blib/lib/NetCDF.pm
> AutoSplitting blib/lib/NetCDF.pm (blib/lib/auto/NetCDF)
> PERL_DL_NONLAZY=1 /uufs/chpc.utah.edu/sys/pkg/perl/5.10.0/bin/perl
> "-Iblib/lib" "-Iblib/arch" test.pl
> Can't load 'blib/arch/auto/NetCDF/NetCDF.so' for module NetCDF:
> blib/arch/auto/NetCDF/NetCDF.so: undefined symbol: ncopts at
> /uufs/chpc.utah.edu/sys/pkg/perl/std/lib/5.10.0/x86_64-linux/DynaLoader.pm
> line 203.
> at test.pl line 5
> Compilation failed in require at test.pl line 5.
> BEGIN failed--compilation aborted at test.pl line 5.
> make[2]: *** [test_dynamic] Error 9
> make[2]: Leaving directory
> `/uufs/chpc.utah.edu/sys/pkg/netcdf-perl/1.2.3-rebuild/src/perl'
> make[1]: *** [perl/test] Error 1
> make[1]: Leaving directory
> `/uufs/chpc.utah.edu/sys/pkg/netcdf-perl/1.2.3-rebuild/src'
> make: *** [test] Error 2
> 
> 
> As you stated earlier about the environment variable LD_NETCDF being
> set, it's being set in the CUSTOMIZE directory as
> 
> LD_NETCDF='-L/uufs/chpc.utah.edu/sys/pkg/netcdf/std_intel/lib/'

You would need to set the LD_NETCDF variable to more than you did.
Try this:

    LD_NETCDF='-L/uufs/chpc.utah.edu/sys/pkg/netcdf/std_intel/lib -lnetcdf'

You'll need to execute the command "make distclean", then set the
LD_NETCDF variable, then execute the "configure" script, then execute
the command "make", and then "make test".

> Thanks,
> Erik
> 
> --
> Erik Brown
> Center for High Performance Computing
> University of Utah
> (801) 824-4996


Regards,
Steve Emmerson

Ticket Details
===================
Ticket ID: AZE-820808
Department: Support netCDF Perl
Priority: Normal
Status: Closed