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[netCDFJava #ZVT-747191]: Latest NcML schema with netCDF-4 support
- Subject: [netCDFJava #ZVT-747191]: Latest NcML schema with netCDF-4 support
- Date: Fri, 17 Oct 2014 10:31:36 -0600
ok, i think i understand now. the intention is to put the values as content:
<enumTypedef name="cloud_t" type="enum1">
<enum key="1">value1</enum>
<enum key="2">value2</enum>
<enum key="3">value3</enum>
<enum key="4">value4</enum>
<enum key="5">value5</enum>
<enum key="6">value6</enum>
<enum key="7">value7</enum>
</enumTypedef>
and i believe thats what the netcdf java library will do.
looking at the schema, im guessing that
<!-- XML encoding of enum typedef object -->
<xsd:element name="enumTypedef">
<xsd:complexType>
<xsd:sequence>
<xsd:element name="enum" minOccurs="1" maxOccurs="unbounded">
<xsd:complexType mixed="true">
<xsd:attribute name="key" type="xsd:int" use="required"/>
</xsd:complexType>
</xsd:element>
</xsd:sequence>
<xsd:attribute name="name" type="xsd:token" use="required"/>
<xsd:attribute name="type" type="DataType" default="enum1"/>
</xsd:complexType>
</xsd:element>
should be
<xsd:element name="enumTypedef">
<xsd:complexType mixed="true">
<xsd:sequence>
<xsd:element name="enum" minOccurs="1" maxOccurs="unbounded">
<xsd:complexType mixed="true">
<xsd:attribute name="key" type="xsd:int" use="required"/>
</xsd:complexType>
</xsd:element>
</xsd:sequence>
<xsd:attribute name="name" type="xsd:token" use="required"/>
<xsd:attribute name="type" type="DataType" default="enum1"/>
</xsd:complexType>
</xsd:element>
?? Does that seem right to you?
In terms of converting CDL to NcML, yes you have to create a binary file as an
intermediary, whether you use the C or Java library to generate the NcML.
BTW, The Java library is the reference implementation for NcML, and the C
library for CDL. The Java library does not currently read CDL.
John
>
> Human V1.0 :)
>
> I'm helping to write specification documents for netCDF products. We
> originally specified the format using CDL notation, but for various reasons,
> we'd like to move to NcML, so I'm manually creating NcML descriptions using
> XMLSpy and validating them against the latest NcML schema.
>
> These are large, complex specifications so I haven't yet written code to
> generate an actual product and I didn't find any way of converting from CDL
> to NcML without an actual intervening file for ncdump to use.
>
> I guess I could generate a small test dataset using CDL and ncgen, and then
> use ncdump to output the contents, just to see how it handles the enhanced
> netCDF features. Would that be useful input?
>
> Regards,
>
> Tim
>
>
>
>
>
> -----Original Message-----
> From: Unidata netCDF Java Support [mailto:address@hidden]
> Sent: Friday, October 17, 2014 4:20 PM
> To: Timothy Patterson
> Cc: address@hidden; Timothy Patterson
> Subject: [netCDFJava #ZVT-747191]: Latest NcML schema with netCDF-4 support
>
> sorry, i meant to say what version of what software program generated the
> ncml?
>
> >
> > It's this one from the website:
> >
> > http://www.unidata.ucar.edu/schemas/netcdf/ncml-2.2.xsd
> >
> > which was updated fairly recently.
> >
> > We're potentially using a number of the enchanced features, so I'll test
> > the ncml schema by converting most of the cdl examples at the link below
> > into ncml equivalents:
> >
> > http://www.unidata.ucar.edu/software/netcdf/workshops/2011/groups-type
> > s/index.html
> >
> > (I'm using the examples as there aren't many actual implementations yet).
> >
> > Thanks,
> >
> > Tim
> > ________________________________________
> > From: Unidata netCDF Java Support
> > [address@hidden]
> > Sent: 17 October 2014 02:19
> > To: Timothy Patterson
> > Cc: address@hidden; Timothy Patterson
> > Subject: [netCDFJava #ZVT-747191]: Latest NcML schema with netCDF-4
> > support
> >
> > Hi Tim:
> >
> > Looks like a bug. What version generated that?
> >
> > John
> >
> > >
> > >
> > > Hi John,
> > >
> > >
> > >
> > > I'm not a schema expert, so I thought I'd check something with you before
> > > raising a ticket in case I have misunderstood something.
> > >
> > >
> > >
> > > netCDF4 has an enumerated datatype that looks like this in cdl:
> > >
> > >
> > >
> > >
> > >
> > > netcdf clouds {
> > >
> > > types:
> > >
> > > byte enum cloud_t {Clear = 0, Cumulonimbus = 1, Stratus = 2,
> > >
> > > Stratocumulus = 3, Cumulus = 4, Altostratus = 5, Nimbostratus = 6,
> > >
> > > Altocumulus = 7, Missing = 127} ;
> > >
> > > dimensions:
> > >
> > > time = UNLIMITED ; // (5 currently)
> > >
> > > variables:
> > >
> > > cloud_t primary_cloud(time) ;
> > >
> > > cloud_t primary_cloud:_FillValue = Missing ;
> > >
> > > data:
> > >
> > >
> > >
> > > primary_cloud = Clear, Stratus, Cumulus, _, Cumulonimbus ;
> > >
> > > }
> > >
> > >
> > >
> > >
> > >
> > > But the ncml schema doesn’t seem to match as I can only define the
> > > integer key values and not the associated strings.
> > >
> > > This appears to be the closest I can get:
> > >
> > >
> > > <enumTypedef name="cloud_t" type="enum1"> <enum key="1"></enum>
> > > <enum key="2"></enum> <enum key="3"></enum> <enum key="4"></enum>
> > > <enum key="5"></enum> <enum key="6"></enum> <enum key="7"></enum>
> > >
> > > </enumTypedef>
> > >
> > >
> > >
> > >
> > >
> > > Am I overlooking something, or is something additional needed in the ncml
> > > schema?
> > >
> > >
> > >
> > > Thanks,
> > >
> > >
> > >
> > > Tim Patterson
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > > -----Original Message-----
> > > From: Unidata netCDF Java Support
> > > [mailto:address@hidden]
> > > Sent: Friday, September 12, 2014 12:32 AM
> > > To: Timothy Patterson
> > > Cc: address@hidden
> > > Subject: [netCDFJava #ZVT-747191]: Latest NcML schema with netCDF-4
> > > support
> > >
> > >
> > >
> > > Hi Timothy:
> > >
> > >
> > >
> > > http://www.unidata.ucar.edu/schemas/netcdf/ncml-2.2.xsd is in fact the
> > > current schema (actually it was one rev out of date but i just updated
> > > it). I think we are stuck with the name (even though we are long past
> > > 2.2) due to backwards compatability. Perhaps we need a version attribute
> > > in it?
> > >
> > >
> > >
> > > The best documentation is:
> > >
> > >
> > >
> > > http://www.unidata.ucar.edu/software/thredds/v4.5/netcdf-java/ncml/A
> > > nnotatedSchema4.html
> > >
> > >
> > >
> > > I hope that is sufficient for your needs.
> > >
> > >
> > >
> > > John
> > >
> > >
> > >
> > > >
> > >
> > > > Dear Dennis,
> > >
> > > >
> > >
> > > > Thanks for the quick response.
> > >
> > > >
> > >
> > > > I'm happy to hear the schema has been updated, but I haven't been able
> > > > to locate the updated version online or as part of any of the
> > > > tools/libraries. Only the previous release at
> > > > http://www.unidata.ucar.edu/schemas/netcdf/ncml-2.2.xsd seems to be
> > > > available.
> > >
> > > >
> > >
> > > > I understand it can take a while for the documentation to be
> > > > updated, but if it is possible to get a copy of the updated schema
> > > > file, that would be a great help. Our datasets are making use of a
> > > > number of the enhanced model features and our ncml descriptions
> > > > are currently "hacked" with our best-guess to cope with the
> > > > missing elements and we'd like to be in line with the official
> > > > schema as soon a possible to avoid problems later
> > >
> > > >
> > >
> > > > Best regards,
> > >
> > > >
> > >
> > > > Tim Patterson
> > >
> > > >
> > >
> > > >
> > >
> > > >
> > >
> > > > -----Original Message-----
> > >
> > > > From: Unidata netCDF Java Support
> > > > [mailto:address@hidden]
> > >
> > > > Sent: Wednesday, September 10, 2014 7:54 PM
> > >
> > > > To: Timothy Patterson
> > >
> > > > Cc:
> > > > address@hidden<mailto:support-netcdf-java@un
> > > > idata.ucar.edu>
> > >
> > > > Subject: [netCDFJava #ZVT-747191]: Latest NcML schema with
> > > > netCDF-4 support
> > >
> > > >
> > >
> > > > A Jira bug-tracking issue was created for this.
> > >
> > > > See https://bugtracking.unidata.ucar.edu/browse/TDS-498
> > >
> > > > It appears to be fixed and tested. It is possible the documentation has
> > > > not caught up with this fix.
> > >
> > > > =Dennis Heimbigner
> > >
> > > > Unidata
> > >
> > > >
> > >
> > > >
> > >
> > > > Ticket Details
> > >
> > > > ===================
> > >
> > > > Ticket ID: ZVT-747191
> > >
> > > > Department: Support netCDF Java
> > >
> > > > Priority: Normal
> > >
> > > > Status: Closed
> > >
> > > >
> > >
> > > >
> > >
> > >
> > >
> > > Ticket Details
> > >
> > > ===================
> > >
> > > Ticket ID: ZVT-747191
> > >
> > > Department: Support netCDF Java
> > >
> > > Priority: Normal
> > >
> > > Status: Closed
> > >
> > >
> > >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: ZVT-747191
> > Department: Support netCDF Java
> > Priority: Normal
> > Status: Open
> >
> >
>
>
> Ticket Details
> ===================
> Ticket ID: ZVT-747191
> Department: Support netCDF Java
> Priority: Normal
> Status: Open
>
>
Ticket Details
===================
Ticket ID: ZVT-747191
Department: Support netCDF Java
Priority: Normal
Status: Open