[netCDFJava #ITA-837813]: HDF5 ArrayIndexOutOfBoundsException

Yes. If you are using netcdfAll.jar, the link is

ftp://ftp.unidata.ucar.edu/pub/netcdf-java/v4.5/netcdfAll-4.5.jar

> Thanks John.
> 
> We use the netCDF JAR. I note that we will need to use the development branch 
> version (4.5) here:  
> http://www.unidata.ucar.edu/software/thredds/v4.5/netcdf-java/documentation.htm
> 
> I assume that is correct?
> 
> Jason
> 
> On 21 Aug 2014, at 5:46 am, Unidata netCDF Java Support <address@hidden> 
> wrote:
> 
> > Hi Jason:
> >
> > You can get release from
> >
> > http://www.unidata.ucar.edu/software/thredds/v4.5/tds/TDS.html
> >
> > Let us know if you have any trouble.
> >
> > John
> >
> >> Hi John et. al.,
> >>
> >> I still don’t see release 4.5.0 on the website .. is that imminent?
> >>
> >> Regards,
> >> Jason
> >>
> >> On 22 May 2014, at 6:24 am, Unidata netCDF Java Support <address@hidden> 
> >> wrote:
> >>
> >>> sorry we got delayed on this, but it should be out today or next week at 
> >>> the latest.
> >>>
> >>> John
> >>>
> >>>
> >>>> You ripper. That’s fantastic..
> >>>>
> >>>> Thanks John.
> >>>>
> >>>> On 27 Mar 2014, at 6:43 am, Unidata netCDF Java Support <address@hidden> 
> >>>> wrote:
> >>>>
> >>>>> Hi Jason:
> >>>>>
> >>>>> The latest build tolerates dimension scales with ndim=0 by ignoring 
> >>>>> them. The fix will be in the 4.5.0 release in a few days.
> >>>>>
> >>>>> John
> >>>>>
> >>>>>> Hi John,
> >>>>>>
> >>>>>> I had to track down the person who reported the error. They are 
> >>>>>> samples from here:
> >>>>>>
> >>>>>> OK, here they http://www.svi.nl/HDF5
> >>>>>> http://www.svi.nl/wikifiles/SVI_HDF5_samples.zip
> >>>>>>
> >>>>>> Now — these were used as samples — and we (collectively) have no 
> >>>>>> relationship to the people at SVI, or do not know whether they 
> >>>>>> generated these files themselves.
> >>>>>>
> >>>>>> If the samples are incorrect, then a derivative question is how (or 
> >>>>>> whether) that error is gracefully handled — perhaps another assertion 
> >>>>>> (if the files violate the specification) indicating the non-compliance 
> >>>>>> or otherwise.
> >>>>>>
> >>>>>> We have ignored extracting metadata from these files with this error 
> >>>>>> to work around. However, the ArrayIndexOutOfBoundsException is obtuse 
> >>>>>> and leads to support calls :-)
> >>>>>>
> >>>>>> Jason
> >>>>>>
> >>>>>>
> >>>>>> On 21 Mar 2014, at 2:59 am, Unidata netCDF Java Support 
> >>>>>> <address@hidden> wrote:
> >>>>>>
> >>>>>>> Hi Jason:
> >>>>>>>
> >>>>>>> We are seeing the exception; the problem are "Dimension Scales" 
> >>>>>>> messages that have ndims=0. Do you know what they are supposed to 
> >>>>>>> mean?  Who wrote this data, we probably need to get them into the 
> >>>>>>> conversation.
> >>>>>>>
> >>>>>>> John
> >>>>>>>
> >>>>>>>> Further to my lodged error, please find attached a sample HDF5 data 
> >>>>>>>> set that triggers the error.
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>> On 19 Mar 2014, at 7:29 am, Unidata netCDF Java Support 
> >>>>>>>> <address@hidden> wrote:
> >>>>>>>>
> >>>>>>>>>
> >>>>>>>>> Jason Lohrey,
> >>>>>>>>>
> >>>>>>>>> Your Ticket has been received, and a Unidata staff member will 
> >>>>>>>>> review it and reply accordingly. Listed below are details of this 
> >>>>>>>>> new Ticket. Please make sure the Ticket ID remains in the Subject: 
> >>>>>>>>> line on all correspondence related to this Ticket.
> >>>>>>>>>
> >>>>>>>>> Ticket ID: ITA-837813
> >>>>>>>>> Subject: HDF5 ArrayIndexOutOfBoundsException
> >>>>>>>>> Department: Support netCDF Java
> >>>>>>>>> Priority: Normal
> >>>>>>>>> Status: Open
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>> Please let us know how we can assist you further.
> >>>>>>>>>
> >>>>>>>>> Unidata User Support
> >>>>>>>>>
> >>>>>>>>
> >>>>>>>> JASON LOHREY
> >>>>>>>> Chief Technical Officer
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>> ARCITECTA
> >>>>>>>> 5/26-36 High Street, Northcote
> >>>>>>>> Victoria, Australia 3070
> >>>>>>>> T:+61 3 9029 3437
> >>>>>>>> M:+61 418 364 941
> >>>>>>>> F:+61 3 9005 2876
> >>>>>>>> http://www.arcitecta.com
> >>>>>>>> Privileged/Confidential Information may be contained in this 
> >>>>>>>> message. If you are not the addressee indicated in this message (or 
> >>>>>>>> responsible for delivery of the message to such person), you may not 
> >>>>>>>> copy or deliver this message to anyone. In such case, you should 
> >>>>>>>> destroy this message and kindly notify the sender by reply email. 
> >>>>>>>> Please advise immediately if you or your employer does not consent 
> >>>>>>>> to email or messages of this kind. Opinions, conclusions and other 
> >>>>>>>> information in this message that do not relate to the official 
> >>>>>>>> business of Arcitecta shall be understood as neither given nor 
> >>>>>>>> endorsed by it.
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>> Ticket Details
> >>>>>>> ===================
> >>>>>>> Ticket ID: ITA-837813
> >>>>>>> Department: Support netCDF Java
> >>>>>>> Priority: Normal
> >>>>>>> Status: Open
> >>>>>>>
> >>>>>>
> >>>>>> JASON LOHREY
> >>>>>> Chief Technical Officer
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> ARCITECTA
> >>>>>> 5/26-36 High Street, Northcote
> >>>>>> Victoria, Australia 3070
> >>>>>> T:+61 3 9029 3437
> >>>>>> M:+61 418 364 941
> >>>>>> F:+61 3 9005 2876
> >>>>>> http://www.arcitecta.com
> >>>>>> Privileged/Confidential Information may be contained in this message. 
> >>>>>> If you are not the addressee indicated in this message (or responsible 
> >>>>>> for delivery of the message to such person), you may not copy or 
> >>>>>> deliver this message to anyone. In such case, you should destroy this 
> >>>>>> message and kindly notify the sender by reply email. Please advise 
> >>>>>> immediately if you or your employer does not consent to email or 
> >>>>>> messages of this kind. Opinions, conclusions and other information in 
> >>>>>> this message that do not relate to the official business of Arcitecta 
> >>>>>> shall be understood as neither given nor endorsed by it.
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>
> >>>>>
> >>>>> Ticket Details
> >>>>> ===================
> >>>>> Ticket ID: ITA-837813
> >>>>> Department: Support netCDF Java
> >>>>> Priority: Normal
> >>>>> Status: Closed
> >>>>>
> >>>>
> >>>> JASON LOHREY
> >>>> Chief Technical Officer
> >>>>
> >>>>
> >>>>
> >>>> ARCITECTA
> >>>> 5/26-36 High Street, Northcote
> >>>> Victoria, Australia 3070
> >>>> T:+61 3 9029 3437
> >>>> M:+61 418 364 941
> >>>> F:+61 3 9005 2876
> >>>> http://www.arcitecta.com
> >>>> Privileged/Confidential Information may be contained in this message. If 
> >>>> you are not the addressee indicated in this message (or responsible for 
> >>>> delivery of the message to such person), you may not copy or deliver 
> >>>> this message to anyone. In such case, you should destroy this message 
> >>>> and kindly notify the sender by reply email. Please advise immediately 
> >>>> if you or your employer does not consent to email or messages of this 
> >>>> kind. Opinions, conclusions and other information in this message that 
> >>>> do not relate to the official business of Arcitecta shall be understood 
> >>>> as neither given nor endorsed by it.
> >>>>
> >>>>
> >>>>
> >>>
> >>>
> >>> Ticket Details
> >>> ===================
> >>> Ticket ID: ITA-837813
> >>> Department: Support netCDF Java
> >>> Priority: Critical
> >>> Status: Closed
> >>>
> >>
> >> JASON LOHREY
> >> Chief Technical Officer
> >>
> >>
> >>
> >> ARCITECTA
> >> 5/26-36 High Street, Northcote
> >> Victoria, Australia 3070
> >> T:+61 3 9029 3437
> >> M:+61 418 364 941
> >> F:+61 3 9005 2876
> >> http://www.arcitecta.com
> >> Privileged/Confidential Information may be contained in this message. If 
> >> you are not the addressee indicated in this message (or responsible for 
> >> delivery of the message to such person), you may not copy or deliver this 
> >> message to anyone. In such case, you should destroy this message and 
> >> kindly notify the sender by reply email. Please advise immediately if you 
> >> or your employer does not consent to email or messages of this kind. 
> >> Opinions, conclusions and other information in this message that do not 
> >> relate to the official business of Arcitecta shall be understood as 
> >> neither given nor endorsed by it.
> >>
> >>
> >>
> >
> > Ticket Details
> > ===================
> > Ticket ID: ITA-837813
> > Department: Support netCDF Java
> > Priority: Critical
> > Status: Closed
> >
> 
> JASON LOHREY
> Chief Technical Officer
> 
> 
> 
> ARCITECTA
> 5/26-36 High Street, Northcote
> Victoria, Australia 3070
> T:+61 3 9029 3437
> M:+61 418 364 941
> F:+61 3 9005 2876
> http://www.arcitecta.com
> Privileged/Confidential Information may be contained in this message. If you 
> are not the addressee indicated in this message (or responsible for delivery 
> of the message to such person), you may not copy or deliver this message to 
> anyone. In such case, you should destroy this message and kindly notify the 
> sender by reply email. Please advise immediately if you or your employer does 
> not consent to email or messages of this kind. Opinions, conclusions and 
> other information in this message that do not relate to the official business 
> of Arcitecta shall be understood as neither given nor endorsed by it.
> 
> 
> 

Ticket Details
===================
Ticket ID: ITA-837813
Department: Support netCDF Java
Priority: Critical
Status: Closed